| Annotated checklist of fishes of Yonaguni-jima island, the westernmost island in Japan K Koeda, Y Hibino, T Yoshida, Y Kimura, R Miki, T Kunishima, D Sasaki, ... The Kagoshima University Museum, Kagoshima. vi, 2016 | 83 | 2016 |
| 緑の火山島口永良部島の魚類 木村祐貴， 日比野友亮， 三木涼平 鹿児島大学総合研究博物館, 2017 | 65 | 2017 |
| Annotated checklist of eels (orders Anguilliformes and Saccopharyngiformes) from Taiwan HC Ho, DG Smith, JE McCOSKER, Y Hibino, KH Loh, KA Tighe, KT Shao Zootaxa 4060 (1), 140–189-140–189, 2015 | 62 | 2015 |
| Four new deepwater Ophichthus (Anguilliformes: Ophichthidae) from Japan with a redescription of Ophichthus pallens (Richardson 1848) Y Hibino, JE McCosker, F Tashiro Ichthyological Research 66, 289-306, 2019 | 26 | 2019 |
| The ichthyofauna of the Uji Islands, East China Sea: 148 new records of fishes with notes on biogeographical implications H Motomura, A Habano, Y Arita, M Matsuoka, K Furuta, K Koeda, ... Memoirs of Faculty of Fisheries Kagoshima University 64, 10-34, 2016 | 24 | 2016 |
| 奄美群島最南端の島―与論島の魚類 本村浩之 (No Title), 2014 | 24 | 2014 |
| Field guide to fishes of Kuchinoerabu-jima Island in the Osumi Group, Kagoshima, southern Japan Y Kimura, Y Hibino, R Miki, T Minetoma, K Koeda The Kagoshima University Museum, Kagoshima, 2017 | 20 | 2017 |
| A review of the finless snake eels of the genus Apterichtus (Anguilliformes: Ophichthidae), with the description of five new species JE McCOSKER, Y Hibino Zootaxa 3941 (1), 49-78, 2015 | 14 | 2015 |
| The worm eel, Muraenichthys okamurai Machida and Ohta 1996, a junior synonym of Muraenichthys borealis Machida and Shiogaki 1990 K Hoshino, Y Hibino, S Kimura, Y Machida Ichthyological research 58, 184-187, 2011 | 13 | 2011 |
| Revision of the Scolecenchelys gymnota species group with descriptions of two new species (Anguilliformes: Ophichthidae: Myrophinae) Y Hibino, S Kimura Ichthyological research 63, 1-22, 2016 | 12 | 2016 |
| Scolecenchelys fuscogularis (Anguilliformes: Ophichthidae, Myrophinae), a new worm eel from Japan Y Hibino, Y Kai, S Kimura Ichthyological research 60, 43-47, 2013 | 12 | 2013 |
| Redescription of a rare worm eel, Muraenichthys macrostomus Bleeker 1864, a senior synonym of Skythrenchelys lentiginosa Castle and McCosker 1999 … Y Hibino, JE McCosker, S Kimura Ichthyological Research 60, 227-231, 2013 | 11 | 2013 |
| Redescription of a rare worm eel, Muraenichthys macrostomus Bleeker 1864, a senior synonym of Skythrenchelys lentiginosa Castle and McCosker 1999 … Y Hibino, JE McCosker, S Kimura Ichthyological Research 60, 227-231, 2013 | 11 | 2013 |
| Validity of Scolecenchelys aoki, with a redescription of Scolecenchelys gymnota (Anguilliformes: Ophichthidae) Y Hibino, S Kimura, K Hoshino, K Hatooka, JE McCosker Ichthyological research 59, 179-188, 2012 | 11 | 2012 |
| Description of a new species of the genus Neenchelys (Anguilliformes: Ophichthidae, Myrophinae) from the eastern Indian Ocean, with comments on the … F Tashiro, Y Hibino, H Imamura Ichthyological research 63, 53-58, 2016 | 10 | 2016 |
| Description of a new catfish, Silurus tomodai (Siluriformes: Siluridae) from central Japan. Y Hibino, R Tabata Zootaxa 4459 (3), 507-524, 2018 | 9 | 2018 |
| A new worm eel Neenchelys mccoskeri (Anguilliformes: Ophichthidae) from Taiwan and Japan Y Hibino, HC Ho, S Kimura Ichthyological Research 59, 342-346, 2012 | 9 | 2012 |
| A new species of the snake eel genus Ophichthus, with additional records from Viet Nam (Anguilliformes: Ophichthidae) Q Van Vo, Y Hibino, HC Ho Zoological Studies 58, 2019 | 8 | 2019 |
| Two new elongate unpatterned moray eels from Taiwan and Vietnam, with notes on two congeners (Anguilliformes: Muraenidae) DG Smith, Y Hibino, HC Ho Zootaxa 4454 (1), 33–42-33–42, 2018 | 8 | 2018 |
| Redescription of the shortfin pomfret, Brama pauciradiata, based on Japanese specimens (Actinopterygii: Perciformes: Bramidae) Y Hibino, M Okada, M Moteki, S Kimura Species Diversity 19 (2), 111-115, 2014 | 8 | 2014 |
