| Reductive genome evolution in Buchnera aphidicola RCHJ Van Ham, J Kamerbeek, C Palacios, C Rausell, F Abascal, ... Proceedings of the National Academy of Sciences 100 (2), 581-586, 2003 | 565 | 2003 |
| Genetic drivers of epigenetic and transcriptional variation in human immune cells L Chen, B Ge, FP Casale, L Vasquez, T Kwan, D Garrido-Martín, S Watt, ... Cell 167 (5), 1398-1414. e24, 2016 | 557 | 2016 |
| An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 1-19, 2016 | 361 | 2016 |
| The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ... Genome biology 20 (1), 1-23, 2019 | 261 | 2019 |
| iHOP web services JM Fernandez, R Hoffmann, A Valencia Nucleic acids research 35 (suppl_2), W21-W26, 2007 | 134 | 2007 |
| Interoperability with Moby 1.0-it's better than sharing your toothbrush! M Wilkinson Nature Precedings, 1-1, 2008 | 126 | 2008 |
| The BLUEPRINT data analysis portal JM Fernández, V de la Torre, D Richardson, R Royo, M Puiggròs, ... Cell systems 3 (5), 491-495. e5, 2016 | 119 | 2016 |
| Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types S Ecker, L Chen, V Pancaldi, FO Bagger, JM Fernández, ... Genome biology 18, 1-17, 2017 | 103 | 2017 |
| Current concepts on microscopic colitis: evidence‐based statements and recommendations of the Spanish Microscopic Colitis Group F Fernández‐Bañares, MJ Casanova, Y Arguedas, B Beltrán, D Busquets, ... Alimentary Pharmacology & Therapeutics 43 (3), 400-426, 2016 | 64 | 2016 |
| Bioinformatics methods for the analysis of expression arrays: data clustering and information extraction J Tamames, D Clark, J Herrero, J Dopazo, C Blaschke, JM Fernández, ... Journal of Biotechnology 98 (2-3), 269-283, 2002 | 61 | 2002 |
| Identification and validation of clinical phenotypes with prognostic implications in patients admitted to hospital with COVID-19: a multicentre cohort study B Gutiérrez-Gutiérrez, MD Del Toro, AM Borobia, A Carcas, I Jarrín, ... The Lancet infectious diseases 21 (6), 783-792, 2021 | 60 | 2021 |
| The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows T Katayama, K Arakawa, M Nakao, K Ono, KF Aoki-Kinoshita, ... Journal of biomedical semantics 1, 1-19, 2010 | 54 | 2010 |
| Integration of biological data by kernels on graph nodes allows prediction of new genes involved in mitotic chromosome condensation JK Hériché, JG Lees, I Morilla, T Walter, B Petrova, MJ Roberti, ... Molecular biology of the cell 25 (16), 2522-2536, 2014 | 53 | 2014 |
| RUbioSeq: a suite of parallelized pipelines to automate exome variation and bisulfite-seq analyses M Rubio-Camarillo, G Gómez-López, JM Fernández, A Valencia, ... Bioinformatics 29 (13), 1687-1689, 2013 | 46 | 2013 |
| The EMBRACE web service collection S Pettifer, J Ison, M Kalaš, D Thorne, P McDermott, I Jonassen, A Liaquat, ... Nucleic acids research 38 (suppl_2), W683-W688, 2010 | 44 | 2010 |
| Packaging research artefacts with RO-Crate S Soiland-Reyes, P Sefton, M Crosas, LJ Castro, F Coppens, ... Data Science 5 (2), 97-138, 2022 | 35 | 2022 |
| Challenge-based learning in aerospace engineering education: The ESA concurrent engineering challenge at the Technical University of Madrid D López-Fernández, PS Sánchez, J Fernández, I Tinao, V Lapuerta Acta Astronautica 171, 369-377, 2020 | 35 | 2020 |
| The CFVib experiment: control of fluids in microgravity with vibrations J Fernandez, PS Sánchez, I Tinao, J Porter, JM Ezquerro Microgravity Science and Technology 29, 351-364, 2017 | 34 | 2017 |
| The Quest for Orthologs benchmark service and consensus calls in 2020 AM Altenhoff, J Garrayo-Ventas, S Cosentino, D Emms, NM Glover, ... Nucleic acids research 48 (W1), W538-W545, 2020 | 33 | 2020 |
| The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications T Katayama, MD Wilkinson, R Vos, T Kawashima, S Kawashima, ... Journal of biomedical semantics 2, 1-18, 2011 | 30 | 2011 |
