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Erik D. Holmstrom
Erik D. Holmstrom
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Title
Cited by
Cited by
Year
Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics
NF Dupuis, ED Holmstrom, DJ Nesbitt
Proceedings of the National Academy of Sciences 111 (23), 8464-8469, 2014
1602014
Synthesis and applications of RNAs with position-selective labelling and mosaic composition
Y Liu, E Holmstrom, J Zhang, P Yu, J Wang, MA Dyba, D Chen, J Ying, ...
Nature 522 (7556), 368-372, 2015
1182015
Single-molecule kinetics reveal cation-promoted DNA duplex formation through ordering of single-stranded helices
NF Dupuis, ED Holmstrom, DJ Nesbitt
Biophysical journal 105 (3), 756-766, 2013
1182013
The SARS-CoV-2 conserved macrodomain is a mono-ADP-ribosylhydrolase
YMO Alhammad, MM Kashipathy, A Roy, JP Gagné, P McDonald, P Gao, ...
Journal of virology 95 (3), 10.1128/jvi. 01969-20, 2021
1112021
Transition path times of coupled folding and binding reveal the formation of an encounter complex
F Sturzenegger, F Zosel, ED Holmstrom, KJ Buholzer, DE Makarov, ...
Nature communications 9 (1), 4708, 2018
1012018
Binding without folding–the biomolecular function of disordered polyelectrolyte complexes
B Schuler, A Borgia, MB Borgia, PO Heidarsson, ED Holmstrom, D Nettels, ...
Current opinion in structural biology 60, 66-76, 2020
872020
Entropic origin of Mg2+-facilitated RNA folding
JL Fiore, ED Holmstrom, DJ Nesbitt
Proceedings of the National Academy of Sciences 109 (8), 2902-2907, 2012
672012
Disordered RNA chaperones can enhance nucleic acid folding via local charge screening
ED Holmstrom, Z Liu, D Nettels, RB Best, B Schuler
Nature communications 10 (1), 2453, 2019
662019
Accurate transfer efficiencies, distance distributions, and ensembles of unfolded and intrinsically disordered proteins from single-molecule FRET
ED Holmstrom, A Holla, W Zheng, D Nettels, RB Best, B Schuler
Methods in enzymology 611, 287-325, 2018
582018
Mechanistic insights into cofactor-dependent coupling of RNA folding and mRNA transcription/translation by a cobalamin riboswitch
JT Polaski, ED Holmstrom, DJ Nesbitt, RT Batey
Cell reports 15 (5), 1100-1110, 2016
502016
Single-molecule conformational dynamics of a biologically functional hydroxocobalamin riboswitch
ED Holmstrom, JT Polaski, RT Batey, DJ Nesbitt
Journal of the American Chemical Society 136 (48), 16832-16843, 2014
502014
Thermodynamic origins of monovalent facilitated RNA folding
ED Holmstrom, JL Fiore, DJ Nesbitt
Biochemistry 51 (18), 3732-3743, 2012
392012
Kinetic and thermodynamic origins of osmolyte-influenced nucleic acid folding
ED Holmstrom, NF Dupuis, DJ Nesbitt
The Journal of Physical Chemistry B 119 (9), 3687-3696, 2015
362015
Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA
Y Liu, E Holmstrom, P Yu, K Tan, X Zuo, DJ Nesbitt, R Sousa, JR Stagno, ...
Nature protocols 13 (5), 987-1005, 2018
352018
Biophysical insights from temperature-dependent single-molecule förster resonance energy transfer
ED Holmstrom, DJ Nesbitt
Annual Review of Physical Chemistry 67 (1), 441-465, 2016
302016
Pulsed IR heating studies of single-molecule DNA duplex dissociation kinetics and thermodynamics
ED Holmstrom, NF Dupuis, DJ Nesbitt
Biophysical Journal 106 (1), 220-231, 2014
292014
The role of counterion valence and size in GAAA tetraloop–receptor docking/undocking kinetics
JL Fiore, ED Holmstrom, LR Fiegland, JH Hodak, DJ Nesbitt
Journal of molecular biology 423 (2), 198-216, 2012
282012
Recognition of single-stranded nucleic acids by small-molecule splicing modulators
Z Tang, S Akhter, A Ramprasad, X Wang, M Reibarkh, J Wang, S Aryal, ...
Nucleic Acids Research 49 (14), 7870-7883, 2021
272021
Real-Time Infrared Overtone Laser Control of Temperature in Picoliter H2O Samples: “Nanobathtubs” for Single Molecule Microscopy
ED Holmstrom, DJ Nesbitt
The journal of physical chemistry letters 1 (15), 2264-2268, 2010
272010
Conformational plasticity of hepatitis C virus core protein enables RNA-induced formation of nucleocapsid-like particles
ED Holmstrom, D Nettels, B Schuler
Journal of molecular biology 430 (16), 2453-2467, 2018
252018
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