|Molecular ecological network analyses|
Y Deng, YH Jiang, Y Yang, Z He, F Luo, J Zhou
BMC bioinformatics 13 (1), 113, 2012
|Reproducibility and quantitation of amplicon sequencing-based detection|
J Zhou, L Wu, Y Deng, X Zhi, YH Jiang, Q Tu, J Xie, JD Van Nostrand, ...
The ISME journal 5 (8), 1303-1313, 2011
|Phylogenetic molecular ecological network of soil microbial communities in response to elevated CO2|
J Zhou, Y Deng, F Luo, Z He, Y Yang
MBio 2 (4), e00122-11, 2011
|Metabolic engineering of Clostridium cellulolyticum for production of isobutanol from cellulose|
W Higashide, Y Li, Y Yang, JC Liao
Appl. Environ. Microbiol. 77 (8), 2727-2733, 2011
|Stochasticity, succession, and environmental perturbations in a fluidic ecosystem|
J Zhou, Y Deng, P Zhang, K Xue, Y Liang, JD Van Nostrand, Y Yang, Z He, ...
Proceedings of the National Academy of Sciences 111 (9), E836-E845, 2014
|High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats|
J Zhou, Z He, Y Yang, Y Deng, SG Tringe, L Alvarez-Cohen
MBio 6 (1), e02288-14, 2015
|Modular organization of protein interaction networks|
F Luo, Y Yang, CF Chen, R Chang, J Zhou, RH Scheuermann
Bioinformatics 23 (2), 207-214, 2007
|Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory|
F Luo, Y Yang, J Zhong, H Gao, L Khan, DK Thompson, J Zhou
BMC bioinformatics 8 (1), 299, 2007
|Nopp140 functions as a molecular link between the nucleolus and the coiled bodies|
C Isaac, Y Yang, U Thomas Meier
The Journal of cell biology 142 (2), 319-329, 1998
|Temperature mediates continental-scale diversity of microbes in forest soils|
J Zhou, Y Deng, L Shen, C Wen, Q Yan, D Ning, Y Qin, K Xue, L Wu, Z He, ...
Nature communications 7, 12083, 2016
|The microbial gene diversity along an elevation gradient of the Tibetan grassland|
Y Yang, Y Gao, S Wang, D Xu, H Yu, L Wu, Q Lin, Y Hu, X Li, Z He, ...
The ISME journal 8 (2), 430-440, 2014
|Responses of the functional structure of soil microbial community to livestock grazing in the T ibetan alpine grassland|
Y Yang, L Wu, Q Lin, M Yuan, D Xu, H Yu, Y Hu, J Duan, X Li, Z He, K Xue, ...
Global change biology 19 (2), 637-648, 2013
|Stochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial community|
J Zhou, W Liu, Y Deng, YH Jiang, K Xue, Z He, JD Van Nostrand, L Wu, ...
Mbio 4 (2), e00584-12, 2013
|Conserved composition of mammalian box H/ACA and box C/D small nucleolar ribonucleoprotein particles and their interaction with the common factor Nopp140|
Y Yang, C Isaac, C Wang, F Dragon, V Pogacic, UT Meier
Molecular Biology of the Cell 11 (2), 567-577, 2000
|Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations|
Y Li, TJ Tschaplinski, NL Engle, CY Hamilton, M Rodriguez, JC Liao, ...
Biotechnology for biofuels 5, 2-2, 2012
|Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation|
Y Deng, P Zhang, Y Qin, Q Tu, Y Yang, Z He, CW Schadt, J Zhou
Environmental microbiology 18 (1), 205-218, 2016
|Application of random matrix theory to biological networks|
F Luo, J Zhong, Y Yang, RH Scheuermann, J Zhou
Physics Letters A 357 (6), 420-423, 2006
|Analyses of soil microbial community compositions and functional genes reveal potential consequences of natural forest succession|
J Cong, Y Yang, X Liu, H Lu, X Liu, J Zhou, D Li, H Yin, J Ding, Y Zhang
Scientific reports 5, 10007, 2015
|Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production|
CL Hemme, H Mouttaki, YJ Lee, G Zhang, L Goodwin, S Lucas, ...
Journal of bacteriology 192 (24), 6494-6496, 2010
|Impacts of Shewanella oneidensis c‐type cytochromes on aerobic and anaerobic respiration|
H Gao, S Barua, Y Liang, L Wu, Y Dong, S Reed, J Chen, D Culley, ...
Microbial biotechnology 3 (4), 455-466, 2010