Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells J Zuin, JR Dixon, MIJA Van Der Reijden, Z Ye, P Kolovos, RWW Brouwer, ... Proceedings of the National Academy of Sciences 111 (3), 996-1001, 2014 | 883 | 2014 |
The core spliceosome as target and effector of non-canonical ATM signalling M Tresini, DO Warmerdam, P Kolovos, L Snijder, MG Vrouwe, ... Nature 523 (7558), 53-58, 2015 | 248 | 2015 |
PRC2 facilitates the regulatory topology required for poised enhancer function during pluripotent stem cell differentiation S Cruz-Molina, P Respuela, C Tebartz, P Kolovos, M Nikolic, R Fueyo, ... Cell stem cell 20 (5), 689-705. e9, 2017 | 227 | 2017 |
Enhancers and silencers: an integrated and simple model for their function P Kolovos, TA Knoch, FG Grosveld, PR Cook, A Papantonis Epigenetics & chromatin 5, 1-8, 2012 | 209 | 2012 |
Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions R Stadhouders, P Kolovos, R Brouwer, J Zuin, A Van Den Heuvel, ... Nature protocols 8 (3), 509-524, 2013 | 176 | 2013 |
Modeling the pathological long-range regulatory effects of human structural variation with patient-specific hiPSCs M Laugsch, M Bartusel, R Rehimi, H Alirzayeva, A Karaolidou, ... Cell Stem Cell 24 (5), 736-752. e12, 2019 | 98 | 2019 |
Targeted Chromatin Capture (T2C): a novel high resolution high throughput method to detect genomic interactions and regulatory elements P Kolovos, HJG van de Werken, N Kepper, J Zuin, RWW Brouwer, ... Epigenetics & chromatin 7, 1-17, 2014 | 93 | 2014 |
Control of developmentally primed erythroid genes by combinatorial co-repressor actions R Stadhouders, A Cico, T Stephen, S Thongjuea, P Kolovos, HI Baymaz, ... Nature communications 6 (1), 8893, 2015 | 86 | 2015 |
The Isl1/Ldb1 complex orchestrates genome-wide chromatin organization to instruct differentiation of multipotent cardiac progenitors L Caputo, HR Witzel, P Kolovos, S Cheedipudi, M Looso, A Mylona, ... Cell stem cell 17 (3), 287-299, 2015 | 76 | 2015 |
Transcription regulation by distal enhancers: who’s in the loop? R Stadhouders, A van den Heuvel, P Kolovos, R Jorna, K Leslie, ... Transcription 3 (4), 181-186, 2012 | 69 | 2012 |
Inter-relationship between testicular dysgenesis and Leydig cell function in the masculinization programming window in the rat S van den Driesche, P Kolovos, S Platts, AJ Drake, RM Sharpe PloS one 7 (1), e30111, 2012 | 68 | 2012 |
Pre-B cell receptor signaling induces immunoglobulin κ locus accessibility by functional redistribution of enhancer-mediated chromatin interactions R Stadhouders, MJW de Bruijn, MB Rother, S Yuvaraj, CR de Almeida, ... PLoS biology 12 (2), e1001791, 2014 | 56 | 2014 |
Exploiting native forces to capture chromosome conformation in mammalian cell nuclei L Brant, T Georgomanolis, M Nikolic, CA Brackley, P Kolovos, ... Molecular Systems Biology 12 (12), 891, 2016 | 55 | 2016 |
TRIM33 switches off Ifnb1 gene transcription during the late phase of macrophage activation F Ferri, A Parcelier, V Petit, AS Gallouet, D Lewandowski, M Dalloz, ... Nature communications 6 (1), 8900, 2015 | 54 | 2015 |
TNFα signalling primes chromatin for NF-κB binding and induces rapid and widespread nucleosome repositioning S Diermeier, P Kolovos, L Heizinger, U Schwartz, T Georgomanolis, ... Genome biology 15, 1-13, 2014 | 53 | 2014 |
Binding of nuclear factor κB to noncanonical consensus sites reveals its multimodal role during the early inflammatory response P Kolovos, T Georgomanolis, A Koeferle, JD Larkin, L Brant, M Nikolicć, ... Genome Research 26 (11), 1478-1489, 2016 | 49 | 2016 |
PR-DUB maintains the expression of critical genes through FOXK1/2-and ASXL1/2/3-dependent recruitment to chromatin and H2AK119ub1 deubiquitination P Kolovos, K Nishimura, A Sankar, S Sidoli, PA Cloos, K Helin, ... Genome research 30 (8), 1119-1130, 2020 | 43 | 2020 |
The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes TA Knoch, M Wachsmuth, N Kepper, M Lesnussa, A Abuseiris, ... Epigenetics & Chromatin 9, 1-22, 2016 | 36 | 2016 |
Chromatin conformation in development and disease I Boltsis, F Grosveld, G Giraud, P Kolovos Frontiers in Cell and Developmental Biology 9, 723859, 2021 | 35 | 2021 |
Whole-genome sequencing, phylogenetic and genomic analysis of Lactiplantibacillus pentosus L33, a potential probiotic strain isolated from fermented sausages OS Stergiou, K Tegopoulos, DE Kiousi, M Tsifintaris, AC Papageorgiou, ... Frontiers in Microbiology 12, 746659, 2021 | 26 | 2021 |