Seuraa
Geet Duggal
Geet Duggal
Ph.D. Student, School of Computer Science, Carnegie Mellon University
Vahvistettu sähköpostiosoite verkkotunnuksessa cs.cmu.edu
Nimike
Viittaukset
Viittaukset
Vuosi
Salmon provides fast and bias-aware quantification of transcript expression
R Patro, G Duggal, MI Love, RA Irizarry, C Kingsford
Nature methods 14 (4), 417-419, 2017
76292017
Identification of alternative topological domains in chromatin
D Filippova, R Patro, G Duggal, C Kingsford
Algorithms for Molecular Biology 9, 1-11, 2014
2402014
Salmon: accurate, versatile and ultrafast quantification from RNA-seq data using lightweight-alignment
R Patro, G Duggal, C Kingsford
BioRxiv 10, 021592, 2015
1642015
Salmon provides accurate, fast, and bias-aware transcript expression estimates using dual-phase inference
R Patro, G Duggal, MI Love, RA Irizarry, C Kingsford
BioRxiv, 021592, 2015
902015
Accurate, fast, and model-aware transcript expression quantification with Salmon
R Patro, G Duggal, C Kingsford
BioRxiv 10, 021592, 2015
632015
Higher-order chromatin domains link eQTLs with the expression of far-away genes
G Duggal, H Wang, C Kingsford
Nucleic acids research 42 (1), 87-96, 2014
572014
Salmon: fast and bias-aware quantification of transcript expression using dual-phase inference
R Patro, G Duggal, MI Love, RA Irizarry, C Kingsford
Salmon: fast and bias-aware quantification of transcript expression using …, 0
23
Interpreting patterns of gene expression: Signatures of coregulation, the data processing inequality, and triplet motifs
WL Ku, G Duggal, Y Li, M Girvan, E Ott
PloS one 7 (2), e31969, 2012
212012
Resolving spatial inconsistencies in chromosome conformation measurements
G Duggal, R Patro, E Sefer, H Wang, D Filippova, S Khuller, C Kingsford
Algorithms for Molecular Biology 8, 1-10, 2013
202013
Deconvolution of ensemble chromatin interaction data reveals the latent mixing structures in cell subpopulations
E Sefer, G Duggal, C Kingsford
Journal of Computational Biology 23 (6), 425-438, 2016
192016
Multiscale identification of topological domains in chromatin
D Filippova, R Patro, G Duggal, C Kingsford
Algorithms in Bioinformatics: 13th International Workshop, WABI 2013, Sophia …, 2013
152013
Topological properties of chromosome conformation graphs reflect spatial proximities within chromatin
H Wang, G Duggal, R Patro, M Girvan, S Hannenhalli, C Kingsford
Proceedings of the International Conference on Bioinformatics, Computational …, 2013
142013
The missing models: A data-driven approach for learning how networks grow
R Patro, G Duggal, E Sefer, H Wang, D Filippova, C Kingsford
Proceedings of the 18th ACM SIGKDD international conference on Knowledge …, 2012
122012
Salmon provides accurate, fast, and bias-aware transcript expression estimates using dual-phase inference. bioRxiv 021592
R Patro, G Duggal, MI Love, RA Irizarry, C Kingsford
Publisher Full Text, 2016
82016
Uncovering many views of biological networks using ensembles of near-optimal partitions
G Duggal, S Navlakha, M Girvan, C Kingsford
Proceedings of the 1st International Workshop on Discovering, Summarizing …, 2010
82010
Graph rigidity reveals well-constrained regions of chromosome conformation embeddings
G Duggal, C Kingsford
BMC bioinformatics 13, 1-13, 2012
32012
Resolving spatial inconsistencies in chromosome conformation data
G Duggal, R Patro, E Sefer, H Wang, D Filippova, S Khuller, C Kingsford
Algorithms in Bioinformatics: 12th International Workshop, WABI 2012 …, 2012
32012
Chromovis: Feature-rich layouts of chromosome conformation graphs
D Filippova, G Duggal, R Patro, C Kingsford
Unpublished manuscript at http://www. cs. cmu. edu/~ dfilippo/projects …, 2013
12013
Algorithms for Identifying Compact Regions of Chromatin and their Relationship to Gene Regulation
G Duggal
Institute for Advanced Studies, 2014
2014
Graph rigidity reveals non-deformable collections of chromosome conformation constraints
G Duggal, C Kingsford
2011
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Artikkelit 1–20