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Muyuan Chen
Muyuan Chen
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Verified email at stanford.edu
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Cited by
Year
Convolutional neural networks for automated annotation of cellular cryo-electron tomograms
M Chen, W Dai, SY Sun, D Jonasch, CY He, MF Schmid, W Chiu, ...
Nature Methods 14 (10), 983, 2017
3002017
A complete data processing workflow for cryo-ET and subtomogram averaging
M Chen, JM Bell, X Shi, SY Sun, Z Wang, SJ Ludtke
Nature methods 16 (11), 1161-1168, 2019
1842019
High resolution single particle refinement in EMAN2. 1
JM Bell, M Chen, PR Baldwin, SJ Ludtke
Methods 100, 25-34, 2016
1812016
Structural diversity of supercoiled DNA
RN Irobalieva, JM Fogg, DJ Catanese Jr, T Sutthibutpong, M Chen, ...
Nature communications 6 (1), 8440, 2015
1812015
Deep learning-based mixed-dimensional Gaussian mixture model for characterizing variability in cryo-EM
M Chen, SJ Ludtke
Nature Methods, 1-7, 2021
1212021
Structural Insights of Transcriptionally Active, Full-Length Androgen Receptor Coactivator Complexes
X Yu, P Yi, RA Hamilton, H Shen, M Chen, CE Foulds, MA Mancini, ...
Molecular Cell 79 (5), 812-823. e4, 2020
1212020
In situ structure and assembly of the multidrug efflux pump AcrAB-TolC
X Shi, M Chen, Z Yu, JM Bell, H Wang, I Forrester, H Villarreal, J Jakana, ...
Nature communications 10 (1), 2635, 2019
1162019
De Novo modeling in cryo-EM density maps with Pathwalking
M Chen, PR Baldwin, SJ Ludtke, ML Baker
Journal of Structural Biology 196 (3), 289-298, 2016
702016
Structure of the 30 kDa HIV-1 RNA dimerization signal by a hybrid Cryo-EM, NMR, and molecular dynamics approach
K Zhang, SC Keane, Z Su, RN Irobalieva, M Chen, V Van, CA Sciandra, ...
Structure 26 (3), 490-498. e3, 2018
642018
Electron Cryo-microscopy Structure of Ebola Virus Nucleoprotein Reveals a Mechanism for Nucleocapsid-like Assembly
Z Su, C Wu, L Shi, P Luthra, GD Pintilie, B Johnson, JR Porter, P Ge, ...
Cell 172 (5), 966-978. e12, 2018
622018
Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions
S Li, Z Su, J Lehmann, V Stamatopoulou, N Giarimoglou, FE Henderson, ...
Nature structural & molecular biology 26 (12), 1094-1105, 2019
582019
New software tools in EMAN2 inspired by EMDatabank map challenge
JM Bell, M Chen, T Durmaz, AC Fluty, SJ Ludtke
Journal of structural biology 204 (2), 283-290, 2018
482018
Visualizing Individual RuBisCO and Its Assembly into Carboxysomes in Marine Cyanobacteria by Cryo-Electron Tomography
W Dai, M Chen, C Myers, SJ Ludtke, BM Pettitt, JA King, MF Schmid, ...
Journal of molecular biology 430 (21), 4156-4167, 2018
482018
In situ structure of the AcrAB-TolC efflux pump at subnanometer resolution
M Chen, X Shi, Z Yu, G Fan, II Serysheva, ML Baker, BF Luisi, SJ Ludtke, ...
Structure, 2021
402021
Stimulus-responsive self-assembly of protein-based fractals by computational design
NE Hernández, WA Hansen, D Zhu, ME Shea, M Khalid, V Manichev, ...
Nature chemistry 11 (7), 605-614, 2019
382019
Flagellum couples cell shape to motility in Trypanosoma brucei
SY Sun, JT Kaelber, M Chen, X Dong, Y Nematbakhsh, J Shi, ...
Proceedings of the National Academy of Sciences 115 (26), E5916-E5925, 2018
342018
Structural and functional analyses of photosystem II in the marine diatom Phaeodactylum tricornutum
O Levitan, M Chen, X Kuang, KY Cheong, J Jiang, M Banal, N Nambiar, ...
Proceedings of the National Academy of Sciences 116 (35), 17316-17322, 2019
332019
Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures
SY Sun, L Segev-Zarko, M Chen, GD Pintilie, MF Schmid, SJ Ludtke, ...
Proceedings of the National Academy of Sciences 119 (6), e2111661119, 2022
322022
Molecular architecture of the chikungunya virus replication complex
YB Tan, D Chmielewski, MCY Law, K Zhang, Y He, M Chen, J Jin, D Luo
Science Advances 8 (48), eadd2536, 2022
272022
Preliminary structural elucidation of β-(1, 3)-glucan synthase from candida glabrata using cryo-electron tomography
C Jiménez-Ortigosa, J Jiang, M Chen, X Kuang, KR Healey, P Castellano, ...
Journal of Fungi 7 (2), 2021
222021
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Articles 1–20