| Microbiome interaction networks and community structure from laboratory-reared and field-collected Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus mosquito vectors S Hegde, K Khanipov, L Albayrak, G Golovko, M Pimenova, MA Saldaña, ... Frontiers in microbiology 9, 2160, 2018 | 127 | 2018 |
| Genotyping of Bartonella bacteria and their animal hosts: current status and perspectives M Kosoy, C McKee, L Albayrak, Y Fofanov Parasitology 145 (5), 543-562, 2018 | 66 | 2018 |
| Bartonella melophagi in blood of domestic sheep (Ovis aries) and sheep keds (Melophagus ovinus) from the southwestern US: cultures, genetic characterization, and ecological … M Kosoy, Y Bai, R Enscore, MR Rizzo, S Bender, V Popov, L Albayrak, ... Veterinary Microbiology 190, 43-49, 2016 | 65 | 2016 |
| The ability of human nuclear DNA to cause false positive low-abundance heteroplasmy calls varies across the mitochondrial genome L Albayrak, K Khanipov, M Pimenova, G Golovko, M Rojas, I Pavlidis, ... BMC genomics 17, 1-10, 2016 | 35 | 2016 |
| Mosquito bottlenecks alter viral mutant swarm in a tissue and time-dependent manner with contraction and expansion of variant positions and diversity EI Patterson, K Khanipov, MM Rojas, TF Kautz, D Rockx-Brouwer, ... Virus evolution 4 (1), vey001, 2018 | 24 | 2018 |
| 16S rRNA gene profiling and genome reconstruction reveal community metabolic interactions and prebiotic potential of medicinal herbs used in neurodegenerative disease and as … CT Peterson, V Sharma, SN Iablokov, L Albayrak, K Khanipov, S Uchitel, ... PLoS One 14 (3), e0213869, 2019 | 23 | 2019 |
| Identification of multidimensional Boolean patterns in microbial communities G Golovko, K Kamil, L Albayrak, AM Nia, RSA Duarte, S Chumakov, ... Microbiome 8, 1-10, 2020 | 8 | 2020 |
| Detection of multi-dimensional co-exclusion patterns in microbial communities L Albayrak, K Khanipov, G Golovko, Y Fofanov Bioinformatics 34 (21), 3695-3701, 2018 | 6 | 2018 |
| Microbiome interaction networks and community structure from laboratory-reared and field-collected Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus mosquito vectors … S Hegde, K Khanipov, L Albayrak, G Golovko, M Pimenova, MA Saldaña, ... | 6 | 2018 |
| Microbiome interaction networks and community structure from lab-reared and field-collected Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus mosquito vectors S Hegde, K Khanipov, L Albayrak, G Golovko, M Pimenova, MA Saldaña, ... bioRxiv, 337311, 2018 | 4 | 2018 |
| Broom: application for non-redundant storage of high throughput sequencing data L Albayrak, K Khanipov, G Golovko, Y Fofanov Bioinformatics 35 (1), 143-145, 2019 | 2 | 2019 |
| Exploration of natural alignment scoring rules and clustering thresholds for bacterial core/pan genome analysis LL Albayrak, K Khanipov, M Rojas, G Golovko, M Pimenova, M Kosoy, ... 2017 IEEE 17th international conference on bioinformatics and bioengineering …, 2017 | 2 | 2017 |
| CoCo: an application to store high-throughput sequencing data in compact text and binary file formats K Khanipov, G Golovko, M Rojas, L Albayrak, O Dobretsberger, ... 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2015 | 2 | 2015 |
| Secondary Analysis of the NCI-60 Whole Exome Sequencing Data Indicates Significant Presence of Propionibacterium acnes Genomic Material in Leukemia … M Rojas, G Golovko, K Khanipov, L Albayrak, S Chumakov, BM Pettitt, ... Plos one 10 (6), e0127799, 2015 | 2 | 2015 |
| Visualizing hidden interactions between microbes in the body G Golovko, K Khanipov, L Albayrak, AM Nia, RSA Duarte, S Chumakov, ... | | 2020 |
| Identification of Complex Multidimensional Patterns in Microbial Communities G George, K Kamil, A Levent, F Yuriy bioRxiv, 540815, 2019 | | 2019 |
| Using High Throughput DNA Sequencing to Evaluate the Accuracy of Serial Dilution Based Tests of Microbial Activities in Oil Pipelines K Khanipov, G Golovko, M Rojas, M Pimenova, L Albayrak, S Chumakov, ... bioRxiv, 323139, 2018 | | 2018 |
| Genotyping of Bartonella bacteria and their animal hosts: current status and perspectives. S Morand, M Kosoy, C McKee, L Albayrak, Y Fofanov | | 2018 |
| Novel Computational Approach for Identification of Highly Mutated Integrated HIV Genomes K Khanipov, L Albayrak, G Golovko, M Pimenova, Y Fofanov, I Pavlidis 2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017 | | 2017 |
| Novel Alignment Based Clustering Algorithms for Pan Genome Analysis of Bacteria Species L Albayrak | | 2016 |
Kamil KhanipovUniversity of Texas Medical BranchVerified email at utmb.edu
