Hamed S. Najafabadi
Hamed S. Najafabadi
Assistant Professor at McGill University
Verified email at mcgill.ca - Homepage
Title
Cited by
Cited by
Year
A compendium of RNA-binding motifs for decoding gene regulation
D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ...
Nature 499 (7457), 172-177, 2013
11102013
Determination and inference of eukaryotic transcription factor sequence specificity
MT Weirauch, A Yang, M Albu, AG Cote, A Montenegro-Montero, P Drewe, ...
Cell 158 (6), 1431-1443, 2014
10632014
The human splicing code reveals new insights into the genetic determinants of disease
HY Xiong, B Alipanahi, LJ Lee, H Bretschneider, D Merico, RKC Yuen, ...
Science 347 (6218), 2015
10192015
C2H2 zinc finger proteins greatly expand the human regulatory lexicon
HS Najafabadi, S Mnaimneh, FW Schmitges, M Garton, KN Lam, A Yang, ...
Nature biotechnology 33 (5), 555-562, 2015
2372015
Systematic discovery of structural elements governing stability of mammalian messenger RNAs
H Goodarzi, HS Najafabadi, P Oikonomou, TM Greco, L Fish, R Salavati, ...
Nature 485 (7397), 264-268, 2012
1672012
Multiparameter functional diversity of human C2H2 zinc finger proteins
FW Schmitges, E Radovani, HS Najafabadi, M Barazandeh, LF Campitelli, ...
Genome research 26 (12), 1742-1752, 2016
992016
Sequence-based prediction of protein-protein interactions by means of codon usage
HS Najafabadi, R Salavati
Genome biology 9 (5), R87, 2008
922008
Single-cell RNA-seq reveals that glioblastoma recapitulates a normal neurodevelopmental hierarchy
CP Couturier, S Ayyadhury, PU Le, J Nadaf, J Monlong, G Riva, R Allache, ...
Nature communications 11 (1), 1-19, 2020
792020
Expression of DRD2 is increased in human pancreatic ductal adenocarcinoma and inhibitors slow tumor growth in mice
P Jandaghi, HS Najafabadi, AS Bauer, AI Papadakis, M Fassan, A Hall, ...
Gastroenterology 151 (6), 1218-1231, 2016
762016
Universal function-specificity of codon usage
HS Najafabadi, H Goodarzi, R Salavati
Nucleic acids research 37 (21), 7014-7023, 2009
612009
Inference of RNA decay rate from transcriptional profiling highlights the regulatory programs of Alzheimer’s disease
R Alkallas, L Fish, H Goodarzi, HS Najafabadi
Nature communications 8 (1), 1-11, 2017
532017
Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities
K Narasimhan, SA Lambert, AWH Yang, J Riddell, S Mnaimneh, H Zheng, ...
Elife 4, e06967, 2015
522015
Amino acid and codon usage profiles: adaptive changes in the frequency of amino acids and codons
H Goodarzi, N Torabi, HS Najafabadi, M Archetti
Gene 407 (1-2), 30-41, 2008
502008
Searching for virulence factors in the non-pathogenic parasite to humans Leishmania tarentolae
H Azizi, K Hassani, Y Taslimi, HS Najafabadi, B Papadopoulou, S Rafati
Parasitology 136 (7), 723-735, 2009
472009
A structural approach reveals how neighbouring C2H2 zinc fingers influence DNA binding specificity
M Garton, HS Najafabadi, FW Schmitges, E Radovani, TR Hughes, ...
Nucleic acids research 43 (19), 9147-9157, 2015
432015
A general framework for interrogation of mRNA stability programs identifies RNA-binding proteins that govern cancer transcriptomes
G Perron, P Jandaghi, S Solanki, M Safisamghabadi, C Storoz, ...
Cell reports 23 (6), 1639-1650, 2018
402018
Global identification of conserved post-transcriptional regulatory programs in trypanosomatids
HS Najafabadi, Z Lu, C MacPherson, V Mehta, V Adoue, T Pastinen, ...
Nucleic acids research 41 (18), 8591-8600, 2013
342013
Diabetes enhances the proliferation of adult pancreatic multipotent progenitor cells and biases their differentiation to more β-cell production
R Razavi, HS Najafabadi, S Abdullah, S Smukler, M Arntfield, ...
Diabetes 64 (4), 1311-1323, 2015
322015
Error minimization explains the codon usage of highly expressed genes in Escherichia coli
HS Najafabadi, J Lehmann, M Omidi
Gene 387 (1-2), 150-155, 2007
282007
Nuclear TARBP2 drives oncogenic dysregulation of RNA splicing and decay
L Fish, A Navickas, B Culbertson, Y Xu, HCB Nguyen, S Zhang, ...
Molecular cell 75 (5), 967-981. e9, 2019
272019
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