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Arzucan Ozgur
Arzucan Ozgur
Department of Computer Engineering, Bogazici University
Verified email at boun.edu.tr - Homepage
Title
Cited by
Cited by
Year
DeepDTA: deep drug–target binding affinity prediction
H Öztürk, A Özgür, E Ozkirimli
Bioinformatics 34 (17), i821-i829, 2018
10532018
Identifying gene-disease associations using centrality on a literature mined gene-interaction network
A Özgür, T Vu, G Erkan, DR Radev
Bioinformatics 24 (13), i277-i285, 2008
4282008
Text categorization with class-based and corpus-based keyword selection
A Özgür, L Özgür, T Güngör
Computer and Information Sciences-ISCIS 2005: 20th International Symposium …, 2005
2182005
WideDTA: prediction of drug-target binding affinity
H Öztürk, E Ozkirimli, A Özgür
arXiv preprint arXiv:1902.04166, 2019
1822019
Semi-supervised classification for extracting protein interaction sentences using dependency parsing
G Erkan, A Özgür, D Radev
Proceedings of the 2007 Joint Conference on Empirical Methods in Natural …, 2007
1782007
BIOSSES: a semantic sentence similarity estimation system for the biomedical domain
G Soğancıoğlu, H Öztürk, A Özgür
Bioinformatics 33 (14), i49-i58, 2017
1742017
PHISTO: pathogen–host interaction search tool
S Durmuş Tekir, T Çakır, E Ardıç, AS Sayılırbaş, G Konuk, M Konuk, ...
Bioinformatics 29 (10), 1357-1358, 2013
1592013
Citation summarization through keyphrase extraction
V Qazvinian, D Radev, A Özgür
Proceedings of the 23rd international conference on computational …, 2010
1372010
A comparative study of SMILES-based compound similarity functions for drug-target interaction prediction
H Öztürk, E Ozkirimli, A Özgür
BMC bioinformatics 17, 1-11, 2016
1342016
Exploring chemical space using natural language processing methodologies for drug discovery
H Öztürk, A Özgür, P Schwaller, T Laino, E Ozkirimli
Drug Discovery Today 25 (4), 689-705, 2020
1332020
A review on computational systems biology of pathogen–host interactions
S Durmuş, T Çakır, A Özgür, R Guthke
Frontiers in microbiology 6, 235, 2015
1262015
GLASS: a comprehensive database for experimentally validated GPCR-ligand associations
WKB Chan, H Zhang, J Yang, JR Brender, J Hur, A Özgür, Y Zhang
Bioinformatics 31 (18), 3035-3042, 2015
1202015
Michigan molecular interactions r2: from interacting proteins to pathways
VG Tarcea, T Weymouth, A Ade, A Bookvich, J Gao, V Mahavisno, ...
Nucleic acids research 37 (suppl_1), D642-D646, 2009
1152009
Supervised and unsupervised machine learning techniques for text document categorization
A Ozgur
Unpublished Master’s Thesis, İstanbul: Boğaziçi University, 2004
1032004
Classification of Beta-Lactamases and Penicillin Binding Proteins Using Ligand-Centric Network Models.
H Öztürk, E Ozkirimli, A Özgür
PloS one 10 (2), e0117874-e0117874, 2015
1022015
Introducing meta-services for biomedical information extraction
F Leitner, M Krallinger, C Rodriguez-Penagos, J Hakenberg, C Plake, ...
Genome biology 9, 1-11, 2008
942008
Improving Named Entity Recognition for Morphologically Rich Languages using Word Embeddings
H Demir, A Özgür
International Conference on Machine Learning and Applications (ICMLA), 2014
922014
Detecting speculations and their scopes in scientific text
A Özgür, D Radev
Proceedings of the 2009 conference on empirical methods in natural language …, 2009
892009
Mining of vaccine-associated IFN-g gene interaction networks using the Vaccine Ontology
A Özgür, Z Xiang, DR Radev, Y He
J Biomed Semantics 2 (Suppl 2), 2011
712011
Balancing Methods for Multi-label Text Classification with Long-Tailed Class Distribution
Y Huang, B Giledereli, A Köksal, A Özgür, E Ozkirimli
Proceedings of the 2021 Conference on Empirical Methods in Natural Language …, 2021
662021
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Articles 1–20