Filip Ginter
Title
Cited by
Cited by
Year
Universal dependencies v1: A multilingual treebank collection
J Nivre, MC De Marneffe, F Ginter, Y Goldberg, J Hajic, CD Manning, ...
Proceedings of the Tenth International Conference on Language Resources and …, 2016
8732016
Universal Stanford dependencies: A cross-linguistic typology.
MC De Marneffe, T Dozat, N Silveira, K Haverinen, F Ginter, J Nivre, ...
LREC 14, 4585-4592, 2014
4652014
BioInfer: a corpus for information extraction in the biomedical domain
S Pyysalo, F Ginter, J Heimonen, J Björne, J Boberg, J Järvinen, ...
BMC bioinformatics 8 (1), 50, 2007
4652007
Distributional semantics resources for biomedical text processing
S Moen, TSS Ananiadou
Proceedings of LBM, 39-44, 2013
3742013
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
A Airola, S Pyysalo, J Björne, T Pahikkala, F Ginter, T Salakoski
BMC bioinformatics 9 (S11), S2, 2008
3272008
CoNLL 2018 shared task: Multilingual parsing from raw text to universal dependencies
D Zeman, J Hajic, M Popel, M Potthast, M Straka, F Ginter, J Nivre, ...
Proceedings of the CoNLL 2018 Shared Task: Multilingual parsing from raw …, 2018
2992018
Comparative analysis of five protein-protein interaction corpora
S Pyysalo, A Airola, J Heimonen, J Björne, F Ginter, T Salakoski
BMC bioinformatics 9 (S3), S6, 2008
2532008
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
2522016
Extracting complex biological events with rich graph-based feature sets
J Björne, J Heimonen, F Ginter, A Airola, T Pahikkala, T Salakoski
Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, 10-18, 2009
2402009
Universal Dependencies 1.2
J Nivre, Ž Agić, MJ Aranzabe, M Asahara, A Atutxa, M Ballesteros, J Bauer, ...
Universal Dependencies Consortium, 2015
1752015
Complex event extraction at PubMed scale
J Björne, F Ginter, S Pyysalo, J Tsujii, T Salakoski
Bioinformatics 26 (12), i382-i390, 2010
1362010
Large-scale event extraction from literature with multi-level gene normalization
S Van Landeghem, J Björne, CH Wei, K Hakala, S Pyysalo, S Ananiadou, ...
PloS one 8 (4), e55814, 2013
1122013
Joint morphological and syntactic analysis for richly inflected languages
B Bohnet, J Nivre, I Boguslavsky, R Farkas, F Ginter, J Hajič
Transactions of the Association for Computational Linguistics 1, 415-428, 2013
1112013
A graph kernel for protein-protein interaction extraction
A Airola, S Pyysalo, J Björne, T Pahikkala, F Ginter, T Salakoski
Proceedings of the workshop on current trends in biomedical natural language …, 2008
1112008
Building the essential resources for Finnish: the Turku Dependency Treebank
K Haverinen, J Nyblom, T Viljanen, V Laippala, S Kohonen, A Missilä, ...
Language Resources and Evaluation 48 (3), 493-531, 2014
932014
University of Turku in the BioNLP'11 shared task
J Björne, F Ginter, T Salakoski
BMC bioinformatics 13 (S11), S4, 2012
732012
New techniques for disambiguation in natural language and their application to biological text
F Ginter, J Boberg, J Järvinen, T Salakoski
Journal of Machine Learning Research 5 (Jun), 605-621, 2004
622004
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
582019
Analysis of link grammar on biomedical dependency corpus targeted at protein-protein interactions
S Pyysalo, F Ginter, T Pahikkala, J Boberg, J Järvinen, T Salakoski, ...
Proceedings of the International Joint Workshop on Natural Language …, 2004
532004
EXTRACTING CONTEXTUALIZED COMPLEX BIOLOGICAL EVENTS WITH RICH GRAPH‐BASED FEATURE SETS
J Björne, J Heimonen, F Ginter, A Airola, T Pahikkala, T Salakoski
Computational Intelligence 27 (4), 541-557, 2011
522011
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Articles 1–20