Anika Cawthorn (formerly Oellrich)
Anika Cawthorn (formerly Oellrich)
Vahvistettu sähköpostiosoite verkkotunnuksessa
Improved exome prioritization of disease genes through cross-species phenotype comparison
PN Robinson, S Köhler, A Oellrich, K Wang, CJ Mungall, SE Lewis, ...
Genome research 24 (2), 340-348, 2014
Text-mining solutions for biomedical research: enabling integrative biology
D Rebholz-Schuhmann, A Oellrich, R Hoehndorf
Nature Reviews Genetics 13 (12), 829-839, 2012
Characterisation of mental health conditions in social media using Informed Deep Learning
G Gkotsis, A Oellrich, S Velupillai, M Liakata, TJP Hubbard, RJB Dobson, ...
Scientific reports 7 (1), 1-11, 2017
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS biology 13 (1), e1002033, 2015
PhenoDigm: analyzing curated annotations to associate animal models with human diseases
D Smedley, A Oellrich, S Köhler, B Ruef, Sanger Mouse Genetics Project, ...
Database 2013, bat025, 2013
The language of mental health problems in social media
G Gkotsis, A Oellrich, TJP Hubbard, RJB Dobson, M Liakata, ...
Third Computational Linguistics and Clinical Psychology Workshop (NAACL), 2016
Automatic concept recognition using the human phenotype ontology reference and test suite corpora
T Groza, S Köhler, S Doelken, N Collier, A Oellrich, D Smedley, FM Couto, ...
Database 2015, bav005, 2015
Relations as patterns: bridging the gap between OBO and OWL
R Hoehndorf, A Oellrich, M Dumontier, J Kelso, D Rebholz-Schuhmann, ...
BMC bioinformatics 11, 1-8, 2010
The digital revolution in phenotyping
A Oellrich, N Collier, T Groza, D Rebholz-Schuhmann, N Shah, ...
Briefings in bioinformatics 17 (5), 819-830, 2016
An ontology approach to comparative phenomics in plants
A Oellrich, RL Walls, EKS Cannon, SB Cannon, L Cooper, J Gardiner, ...
Plant methods 11, 1-15, 2015
Don’t Let Notes Be Misunderstood: A Negation Detection Method for Assessing Risk of Suicide in Mental Health Records
G Gkotsis, S Velupillai, A Oellrich, H Dean, M Liakata, R Dutta
Third Computational Linguistics and Clinical Psychology Workshop (NAACL), 2016
Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoning
R Hoehndorf, M Dumontier, A Oellrich, D Rebholz-Schuhmann, ...
PloS one 6 (7), e22006, 2011
A common layer of interoperability for biomedical ontologies based on OWL EL
R Hoehndorf, M Dumontier, A Oellrich, S Wimalaratne, ...
Bioinformatics 27 (7), 1001-1008, 2011
Interoperability between phenotype and anatomy ontologies
R Hoehndorf, A Oellrich, D Rebholz-Schuhmann
Bioinformatics 26 (24), 3112-3118, 2010
PhenoMiner: from text to a database of phenotypes associated with OMIM diseases
N Collier, T Groza, D Smedley, PN Robinson, A Oellrich, ...
Database 2015, bav104, 2015
Linking gene expression to phenotypes via pathway information
I Papatheodorou, A Oellrich, D Smedley
Journal of biomedical semantics 6, 1-7, 2015
Sanger Mouse Genetics P, Wang K, Mungall CJ, et al. Improved exome prioritization of disease genes through cross-species phenotype comparison
PN Robinson, S Kohler, A Oellrich
Genome Res 24 (2), 340-8, 2014
Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes
A Oellrich, N Collier, D Smedley, T Groza
PloS one 10 (1), e0116040, 2015
Linking PharmGKB to phenotype studies and animal models of disease for drug repurposing
R Hoehndorf, A Oellrich, D Rebholz-Schuhmann, PN Schofield, ...
Biocomputing 2012, 388-399, 2012
Disease insights through cross-species phenotype comparisons
MA Haendel, N Vasilevsky, M Brush, HS Hochheiser, J Jacobsen, ...
Mammalian Genome 26, 548-555, 2015
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Artikkelit 1–20