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Biola M. Javierre
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Lineage-specific genome architecture links enhancers and non-coding disease variants to target gene promoters
BM Javierre, OS Burren, SP Wilder, R Kreuzhuber, SM Hill, S Sewitz, ...
Cell 167 (5), 1369-1384. e19, 2016
9642016
Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus
BM Javierre, AF Fernandez, J Richter, F Al-Shahrour, JI Martin-Subero, ...
Genome research 20 (2), 170-179, 2010
7252010
The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery
HG Stunnenberg, S Abrignani, D Adams, M de Almeida, L Altucci, V Amin, ...
Cell 167 (5), 1145-1149, 2016
5102016
The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements
S Schoenfelder, M Furlan-Magaril, B Mifsud, F Tavares-Cadete, R Sugar, ...
Genome research 25 (4), 582-597, 2015
4582015
CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data
J Cairns, P Freire-Pritchett, SW Wingett, C Várnai, A Dimond, V Plagnol, ...
Genome biology 17, 1-17, 2016
3932016
Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome
S Schoenfelder, R Sugar, A Dimond, BM Javierre, H Armstrong, B Mifsud, ...
Nature genetics 47 (10), 1179-1186, 2015
3782015
The dynamic DNA methylomes of double-stranded DNA viruses associated with human cancer
AF Fernandez, C Rosales, P Lopez-Nieva, O Graña, E Ballestar, ...
Genome research 19 (3), 438-451, 2009
3002009
Genome-wide mapping of long-range contacts unveils clustering of DNA double-strand breaks at damaged active genes
F Aymard, M Aguirrebengoa, E Guillou, BM Javierre, B Bugler, C Arnould, ...
Nature structural & molecular biology 24 (4), 353-361, 2017
2482017
Human pancreatic islet three-dimensional chromatin architecture provides insights into the genetics of type 2 diabetes
I Miguel-Escalada, S Bonàs-Guarch, I Cebola, J Ponsa-Cobas, ...
Nature genetics 51 (7), 1137-1148, 2019
2302019
Dynamic rewiring of promoter-anchored chromatin loops during adipocyte differentiation
R Siersbæk, JGS Madsen, BM Javierre, R Nielsen, EK Bagge, J Cairns, ...
Molecular cell 66 (3), 420-435. e5, 2017
2052017
Comparison of Hi-C results using in-solution versus in-nucleus ligation
T Nagano, C Várnai, S Schoenfelder, BM Javierre, SW Wingett, P Fraser
Genome biology 16, 1-13, 2015
1872015
The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia
R Beekman, V Chapaprieta, N Russiñol, R Vilarrasa-Blasi, ...
Nature medicine 24 (6), 868-880, 2018
1852018
Leptin and TNF-alpha promoter methylation levels measured by MSP could predict the response to a low-calorie diet
P Cordero, J Campion, FI Milagro, E Goyenechea, T Steemburgo, ...
Journal of physiology and biochemistry 67, 463-470, 2011
1822011
Environmental triggers and epigenetic deregulation in autoimmune disease
BM Javierre, H Hernando, E Ballestar
Discovery medicine 12 (67), 535-545, 2011
1772011
Promoter capture Hi-C: high-resolution, genome-wide profiling of promoter interactions
S Schoenfelder, BM Javierre, M Furlan-Magaril, SW Wingett, P Fraser
JoVE (Journal of Visualized Experiments), e57320, 2018
1112018
IL-4 orchestrates STAT6-mediated DNA demethylation leading to dendritic cell differentiation
R Vento-Tormo, C Company, J Rodríguez-Ubreva, L de la Rica, ...
Genome biology 17, 1-18, 2016
1102016
Long-range enhancer interactions are prevalent in mouse embryonic stem cells and are reorganized upon pluripotent state transition
CL Novo, BM Javierre, J Cairns, A Segonds-Pichon, SW Wingett, ...
Cell reports 22 (10), 2615-2627, 2018
1032018
Chromosome contacts in activated T cells identify autoimmune disease candidate genes
OS Burren, A Rubio García, BM Javierre, DB Rainbow, J Cairns, ...
Genome biology 18, 1-19, 2017
852017
Highly interconnected enhancer communities control lineage-determining genes in human mesenchymal stem cells
JGS Madsen, MS Madsen, A Rauch, S Traynor, EL Van Hauwaert, ...
Nature Genetics 52 (11), 1227-1238, 2020
642020
Promoter interactome of human embryonic stem cell-derived cardiomyocytes connects GWAS regions to cardiac gene networks
MK Choy, BM Javierre, SG Williams, SL Baross, Y Liu, SW Wingett, ...
Nature communications 9 (1), 2526, 2018
642018
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