| A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021 | 209 | 2021 |
| Collagen type IV alpha 1 (COL4A1) and collagen type XIII alpha 1 (COL13A1) produced in cancer cells promote tumor budding at the invasion front in human urothelial carcinoma of … M Miyake, S Hori, Y Morizawa, Y Tatsumi, M Toritsuka, S Ohnishi, ... Oncotarget 8 (22), 36099, 2017 | 95 | 2017 |
| Short day transcriptomic programming during induction of dormancy in grapevine AY Fennell, KA Schlauch, S Gouthu, LG Deluc, V Khadka, L Sreekantan, ... Frontiers in plant science 6, 834, 2015 | 63 | 2015 |
| HIF1 mediates a switch in pyruvate kinase isoforms after myocardial infarction AL Williams, V Khadka, M Tang, A Avelar, KJ Schunke, M Menor, ... Physiological genomics 50 (7), 479-494, 2018 | 57 | 2018 |
| Plasma microRNA pair panels as novel biomarkers for detection of early stage breast cancer R Fang, Y Zhu, L Hu, VS Khadka, J Ai, H Zou, D Ju, B Jiang, Y Deng, X Hu Frontiers in physiology 9, 1879, 2019 | 54 | 2019 |
| RNA sequencing-based analysis of the laying hen uterus revealed the novel genes and biological pathways involved in the eggshell biomineralization N Sah, DL Kuehu, VS Khadka, Y Deng, K Peplowska, R Jha, B Mishra Scientific reports 8 (1), 16853, 2018 | 49 | 2018 |
| Selenoprotein M promotes hypothalamic leptin signaling and thioredoxin antioxidant activity T Gong, AC Hashimoto, AR Sasuclark, VS Khadka, A Gurary, MW Pitts Antioxidants & Redox Signaling 35 (10), 775-787, 2021 | 42 | 2021 |
| Epigenetic delay in the neurodevelopmental trajectory of DNA methylation states in autism spectrum disorders MJ Corley, N Vargas-Maya, APS Pang, A Lum-Jones, D Li, V Khadka, ... Frontiers in Genetics 10, 907, 2019 | 40 | 2019 |
| The landscape of bacterial presence in tumor and adjacent normal tissue across 9 major cancer types using TCGA exome sequencing RM Rodriguez, BY Hernandez, M Menor, Y Deng, VS Khadka Computational and Structural Biotechnology Journal 18, 631-641, 2020 | 37 | 2020 |
| Selenoprotein K deficiency inhibits melanoma by reducing calcium flux required for tumor growth and metastasis MP Marciel, VS Khadka, Y Deng, P Kilicaslan, A Pham, P Bertino, K Lee, ... Oncotarget 9 (17), 13407, 2018 | 32 | 2018 |
| Normalization of soluble CD163 levels after institution of antiretroviral therapy during acute HIV infection tracks with fewer neurological abnormalities ML D’Antoni, MM Byron, P Chan, N Sailasuta, C Sacdalan, ... The Journal of Infectious Diseases 218 (9), 1453-1463, 2018 | 31 | 2018 |
| Development of a miRNA-seq based prognostic signature in lung adenocarcinoma C Siriwardhana, VS Khadka, JJ Chen, Y Deng BMC cancer 19, 1-10, 2019 | 29 | 2019 |
| Juvenile Shank3b deficient mice present with behavioral phenotype relevant to autism spectrum disorder C Balaan, MJ Corley, T Eulalio, APS Pang, R Fang, VS Khadka, ... Behavioural brain research 356, 137-147, 2019 | 29 | 2019 |
| The evaluation of serum biomarkers for non-small cell lung cancer (NSCLC) diagnosis R Fang, Y Zhu, VS Khadka, F Zhang, B Jiang, Y Deng Frontiers in physiology 9, 1710, 2018 | 25 | 2018 |
| Transcriptomic response is more sensitive to water deficit in shoots than roots of Vitis riparia (Michx.) VS Khadka, K Vaughn, J Xie, P Swaminathan, Q Ma, GR Cramer, ... BMC plant biology 19, 1-20, 2019 | 23 | 2019 |
| Upregulated ethanolamine phospholipid synthesis via selenoprotein I is required for effective metabolic reprogramming during T cell activation C Ma, FKW Hoffmann, MP Marciel, KE Page, MA Williams-Aduja, ... Molecular Metabolism 47, 101170, 2021 | 22 | 2021 |
| Cell-type specific analysis of selenium-related genes in brain AR Sasuclark, VS Khadka, MW Pitts Antioxidants 8 (5), 120, 2019 | 20 | 2019 |
| Dysregulated KRAS gene-signaling axis and abnormal chromatin remodeling drive therapeutic resistance in heterogeneous-sized circulating tumor cells in gastric cancer patients Y Chen, Y Li, C Qi, C Zhang, D Liu, Y Deng, Y Fu, VS Khadka, DD Wang, ... Cancer Letters 517, 78-87, 2021 | 19 | 2021 |
| Ratio-based method to identify true biomarkers by normalizing circulating ncRNA sequencing and quantitative PCR data Y Deng, Y Zhu, H Wang, VS Khadka, L Hu, J Ai, Y Dou, Y Li, S Dai, ... Analytical chemistry 91 (10), 6746-6753, 2019 | 19 | 2019 |
| A mutation in the tuft mouse disrupts TET1 activity and alters the expression of genes that are crucial for neural tube closure KSK Fong, RB Hufnagel, VS Khadka, MJ Corley, AK Maunakea, ... Disease Models & Mechanisms 9 (5), 585-596, 2016 | 17 | 2016 |
