Kaiyuan Zhu
Kaiyuan Zhu
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Sketching algorithms for genomic data analysis and querying in a secure enclave
C Kockan, K Zhu, N Dokmai, N Karpov, MO Kulekci, DP Woodruff, ...
Nature methods 17 (3), 295-301, 2020
Optimal compressed representation of high throughput sequence data via light assembly
AA Ginart, J Hui, K Zhu, I Numanagić, TA Courtade, SC Sahinalp, DN Tse
Nature communications 9 (1), 1-9, 2018
Privacy-preserving genotype imputation in a trusted execution environment
N Dokmai, C Kockan, K Zhu, XF Wang, SC Sahinalp, H Cho
Cell Systems 12 (10), 983-993. e7, 2021
Combinatorial detection of conserved alteration patterns for identifying cancer subnetworks
E Hodzic, R Shrestha, K Zhu, K Cheng, CC Collins, S Cenk Sahinalp
GigaScience 8 (4), giz024, 2019
Strain level microbial detection and quantification with applications to single cell metagenomics
K Zhu, AA Schäffer, W Robinson, J Xu, E Ruppin, AF Ergun, Y Ye, ...
Nature Communications 13 (1), 1-19, 2022
CSI-Microbes: Identifying cell-type specific intracellular microbes from single-cell RNA-seq data
W Robinson, F Schischlik, EM Gertz, JS Lee, K Zhu, SC Sahinalp, R Patro, ...
bioRxiv, 2020.05. 14.096230, 2021
A graph-based approach for proteoform identification and quantification using top-down homogeneous multiplexed tandem mass spectra
K Zhu, X Liu
BMC bioinformatics 19 (9), 77-84, 2018
Genomic Data Compression
K Zhu, I Numanagić, SC Sahinalp
Journal: Encyclopedia of Big Data Technologies, 783-783, 2019
Approximating Max NAE-k-SAT by anonymous local search
A Xian, K Zhu, D Zhu, L Pu, H Liu
Theoretical Computer Science 657, 54-63, 2017
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