Dustin Machi
Dustin Machi
Vahvistettu sähköpostiosoite verkkotunnuksessa
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
AR Wattam, JJ Davis, R Assaf, S Boisvert, T Brettin, C Bun, N Conrad, ...
Nucleic acids research 45 (D1), D535-D542, 2017
PATRIC, the bacterial bioinformatics database and analysis resource
AR Wattam, D Abraham, O Dalay, TL Disz, T Driscoll, JL Gabbard, ...
Nucleic acids research 42 (D1), D581-D591, 2014
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
JJ Davis, AR Wattam, RK Aziz, T Brettin, R Butler, RM Butler, P Chlenski, ...
Nucleic acids research 48 (D1), D606-D612, 2020
PATRIC as a unique resource for studying antimicrobial resistance
DA Antonopoulos, R Assaf, RK Aziz, T Brettin, C Bun, N Conrad, JJ Davis, ...
Briefings in bioinformatics 20 (4), 1094-1102, 2019
Assembly, annotation, and comparative genomics in PATRIC, the all bacterial bioinformatics resource center
AR Wattam, T Brettin, JJ Davis, S Gerdes, R Kenyon, D Machi, C Mao, ...
Comparative Genomics, 79-101, 2018
Evaluating the impact of international airline suspensions on the early global spread of COVID-19
A Adiga, S Venkatramanan, J Schlitt, A Peddireddy, A Dickerman, A Bura, ...
MedRxiv, 2020
Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination
S Truelove, CP Smith, M Qin, LC Mullany, RK Borchering, J Lessler, ...
Elife 11, e73584, 2022
Generative modeling of human behavior and social interactions using abductive analysis
Y Ren, V Cedeno-Mieles, Z Hu, X Deng, A Adiga, C Barrett, S Ekanayake, ...
2018 IEEE/ACM International Conference on Advances in Social Networks …, 2018
Evaluating the impact of international airline suspensions on COVID-19 direct importation risk
A Adiga, S Venkatramanan, A Peddireddy, A Telionis, A Dickerman, ...
medRxiv, 2020
net. science: A cyberinfrastructure for sustained innovation in network science and engineering
N Ahmed, R Alo, C Amelink, YY Baek, A Chudhary, K Collins, A Esterline, ...
Gateways Conference 2020, 2020
From 5vs to 6cs: Operationalizing epidemic data management with covid-19 surveillance
AS Peddireddy, D Xie, P Patil, ML Wilson, D Machi, S Venkatramanan, ...
2020 IEEE International Conference on Big Data (Big Data), 1380-1387, 2020
Networked experiments and modeling for producing collective identity in a group of human subjects using an iterative abduction framework
V Cedeno-Mieles, Z Hu, Y Ren, X Deng, A Adiga, C Barrett, N Contractor, ...
Social Network Analysis and Mining 10 (1), 1-43, 2020
RNA-Rocket: an RNA-Seq analysis resource for infectious disease research
AS Warren, C Aurrecoechea, B Brunk, P Desai, S Emrich, ...
Bioinformatics 31 (9), 1496-1498, 2015
Scalable epidemiological workflows to support covid-19 planning and response
D Machi, P Bhattacharya, S Hoops, J Chen, H Mortveit, S Venkatramanan, ...
2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2021
A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes
M VanOeffelen, M Nguyen, D Aytan-Aktug, T Brettin, EM Dietrich, ...
Briefings in Bioinformatics 22 (6), bbab313, 2021
Mechanistic and data-driven agent-based models to explain human behavior in online networked group anagram games
V Cedeno-Mieles, Z Hu, X Deng, Y Ren, A Adiga, C Barrett, S Ekanayake, ...
2019 IEEE/ACM International Conference on Advances in Social Networks …, 2019
Pipelines and their compositions for modeling and analysis of controlled online networked social science experiments
V Cedeno-Mieles, Y Ren, S Ekanayake, BJ Goode, CJ Kuhlman, D Machi, ...
2018 Winter Simulation Conference (WSC), 774-785, 2018
Impact of SARS-CoV-2 vaccination of children ages 5–11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021–March 2022: A multi …
RK Borchering, LC Mullany, E Howerton, M Chinazzi, CP Smith, M Qin, ...
The Lancet Regional Health-Americas 17, 100398, 2023
Csonnet: an agent-based modeling software system for discrete time simulation
JD Priest, A Kishore, L Machi, CJ Kuhlman, D Machi, SS Ravi
2021 Winter Simulation Conference (WSC), 1-12, 2021
On the modeling and agent-based simulation of a cooperative group anagram game
Z Hu, X Deng, BJ Goode, N Ramakrishnan, P Saraf, N Self, A Adiga, ...
2019 Winter Simulation Conference (WSC), 169-180, 2019
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Artikkelit 1–20