|Genome-wide mapping and characterization of Notch-regulated long noncoding RNAs in acute leukemia|
T Trimarchi, E Bilal, P Ntziachristos, G Fabbri, R Dalla-Favera, A Tsirigos, ...
Cell 158 (3), 593-606, 2014
|Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge|
AL Tarca, M Lauria, M Unger, E Bilal, S Boue, K Kumar Dey, J Hoeng, ...
Bioinformatics 29 (22), 2892-2899, 2013
|Systematic analysis of challenge-driven improvements in molecular prognostic models for breast cancer|
AA Margolin, E Bilal, E Huang, TC Norman, L Ottestad, BH Mecham, ...
Science translational medicine 5 (181), 181re1-181re1, 2013
|Mitochondrial DNA haplogroup D4a is a marker for extreme longevity in Japan|
E Bilal, R Rabadan, G Alexe, N Fuku, H Ueno, Y Nishigaki, Y Fujita, M Ito, ...
PLoS One 3 (6), e2421, 2008
|Improving breast cancer survival analysis through competition-based multidimensional modeling|
E Bilal, J Dutkowski, J Guinney, IS Jang, BA Logsdon, G Pandey, ...
PLoS computational biology 9 (5), e1003047, 2013
|Molecular profiling of a lethal tumor microenvironment, as defined by stromal caveolin-1 status in breast cancers.|
AK Witkiewicz, J Kline, M Queenan, JR Brody, A Tsirigos, S Pavlides, ...
Cell cycle (Georgetown, Tex.) 10 (11), 2011
|Enhancing next‐generation sequencing‐guided cancer care through cognitive computing|
NM Patel, VV Michelini, JM Snell, S Balu, AP Hoyle, JS Parker, ...
The oncologist 23 (2), 179-185, 2018
|Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach|
P Meyer, T Cokelaer, D Chandran, KH Kim, PR Loh, G Tucker, M Lipson, ...
BMC systems biology 8 (1), 1-18, 2014
|Enrichment of longevity phenotype in mtDNA haplogroups D4b2b, D4a, and D5 in the Japanese population|
G Alexe, N Fuku, E Bilal, H Ueno, Y Nishigaki, Y Fujita, M Ito, Y Arai, ...
Human genetics 121 (3), 347-356, 2007
|Understanding the limits of animal models as predictors of human biology: lessons learned from the sbv IMPROVER Species Translation Challenge|
K Rhrissorrakrai, V Belcastro, E Bilal, R Norel, C Poussin, C Mathis, ...
Bioinformatics 31 (4), 471-483, 2015
|GenomicTools: a computational platform for developing high-throughput analytics in genomics|
A Tsirigos, N Haiminen, E Bilal, F Utro
Bioinformatics 28 (2), 282-283, 2012
|Amplified loci on chromosomes 8 and 17 predict early relapse in ER-positive breast cancers|
E Bilal, K Vassallo, D Toppmeyer, N Barnard, IH Rye, V Almendro, ...
PloS one 7 (6), e38575, 2012
|The species translation challenge—a systems biology perspective on human and rat bronchial epithelial cells|
C Poussin, C Mathis, LG Alexopoulos, DE Messinis, RHJ Dulize, ...
Scientific Data 1 (1), 1-14, 2014
|Comparing sequencing assays and human-machine analyses in actionable genomics for glioblastoma|
KO Wrzeszczynski, MO Frank, T Koyama, K Rhrissorrakrai, N Robine, ...
Neurology Genetics 3 (4), 2017
|ErbB2, EphrinB1, Src kinase and PTPN13 signaling complex regulates MAP kinase signaling in human cancers|
PD Vermeer, M Bell, K Lee, DW Vermeer, BG Wieking, E Bilal, G Bhanot, ...
PloS one 7 (1), e30447, 2012
|Elafin drives poor outcome in high-grade serous ovarian cancers and basal-like breast tumors|
SI Labidi-Galy, A Clauss, V Ng, S Duraisamy, KM Elias, HY Piao, E Bilal, ...
Oncogene 34 (3), 373-383, 2015
|Identification of the YES1 kinase as a therapeutic target in basal-like breast cancers|
E Bilal, G Alexe, M Yao, L Cong, A Kulkarni, V Ginjala, D Toppmeyer, ...
Genes & cancer 1 (10), 1063-1073, 2010
|DREAMTools: a Python package for scoring collaborative challenges|
T Cokelaer, M Bansal, C Bare, E Bilal, BM Bot, EC Neto, F Eduati, ...
F1000Research 4, 2015
|Metabotropic glutamate receptor 1 expression and its polymorphic variants associate with breast cancer phenotypes|
MS Mehta, SC Dolfi, R Bronfenbrener, E Bilal, C Chen, D Moore, Y Lin, ...
PLoS One 8 (7), e69851, 2013
|Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge|
A Dayarian, R Romero, Z Wang, M Biehl, E Bilal, S Hormoz, P Meyer, ...
Bioinformatics 31 (4), 462-470, 2015