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Timothy G. Amos
Timothy G. Amos
Bioinformatics Software Engineer, Garvan Institute of Medical Research
Verified email at garvan.org.au
Title
Cited by
Cited by
Year
Small RNA interactome of pathogenic E. coli revealed through crosslinking of RNase E
SA Waters, SP McAteer, G Kudla, I Pang, NP Deshpande, TG Amos, ...
The EMBO journal 36 (3), 374-387, 2017
1732017
Draft genome assembly of the invasive cane toad, Rhinella marina
RJ Edwards, DE Tuipulotu, TG Amos, D O'Meally, MF Richardson, ...
Gigascience 7 (9), giy095, 2018
79*2018
Fast nanopore sequencing data analysis with SLOW5
H Gamaarachchi, H Samarakoon, SP Jenner, JM Ferguson, TG Amos, ...
Nature biotechnology 40 (7), 1026-1029, 2022
542022
Transcriptome analysis of human brain tissue identifies reduced expression of complement complex C1Q Genes in Rett syndrome
P Lin, L Nicholls, H Assareh, Z Fang, TG Amos, RJ Edwards, AA Assareh, ...
BMC genomics 17, 1-11, 2016
502016
High risk human papilloma viruses (HPVs) are present in benign prostate tissues before development of HPV associated prostate cancer
WK Glenn, CC Ngan, TG Amos, RJ Edwards, J Swift, L Lutze-Mann, ...
Infectious agents and cancer 12, 1-10, 2017
462017
Antarctic desert soil bacteria exhibit high novel natural product potential, evaluated through long‐read genome sequencing and comparative genomics
N Benaud, RJ Edwards, TG Amos, PM D'Agostino, C Gutiérrez‐Chávez, ...
Environmental microbiology 23 (7), 3646-3664, 2021
242021
The neonatal CD8+ T cell repertoire rapidly diversifies during persistent viral infection
V Venturi, K Nzingha, TG Amos, WC Charles, I Dekhtiarenko, L Cicin-Sain, ...
The Journal of Immunology 196 (4), 1604-1616, 2016
212016
Flexible and efficient handling of nanopore sequencing signal data with slow5tools
H Samarakoon, JM Ferguson, SP Jenner, TG Amos, S Parameswaran, ...
Genome Biology 24 (1), 69, 2023
122023
Oncogenic cooperation between TCF7-SPI1 and NRAS(G12D) requires β-catenin activity to drive T-cell acute lymphoblastic leukemia
Q Van Thillo, J De Bie, JA Seneviratne, S Demeyer, S Omari, ...
Nature Communications 12 (1), 4164, 2021
122021
Chromosome‐level de novo genome assembly of Telopea speciosissima (New South Wales waratah) using long‐reads, linked‐reads and Hi‐C
SH Chen, M Rossetto, M van der Merwe, P Lu‐Irving, JYS Yap, ...
Molecular Ecology Resources 22 (5), 1836-1854, 2022
112022
CAR+ and CAR T cells share a differentiation trajectory into an NK-like subset after CD19 CAR T cell infusion in patients with B cell malignancies
RHY Louie, C Cai, J Samir, M Singh, IW Deveson, JM Ferguson, TG Amos, ...
Nature Communications 14 (1), 7767, 2023
22023
Horizontal transposon transfer and its implications for the ancestral ecology of hydrophiine snakes
JD Galbraith, AJ Ludington, KL Sanders, TG Amos, VA Thomson, ...
Genes 13 (2), 217, 2022
22022
Expanded T cell clones with lymphoma driver somatic mutations in refractory celiac disease
M Singh, RHY Louie, J Samir, MA Field, C Milthorpe, T Aldiriki, J Mackie, ...
medRxiv, 2024.03. 17.24304320, 2024
2024
Whole‐mitogenome analysis unveils previously undescribed genetic diversity in cane toads across their invasion trajectory
K Cheung, TG Amos, R Shine, JL DeVore, S Ducatez, RJ Edwards, ...
Ecology and Evolution 14 (3), 2024
2024
Mitochondrial genome analyses uncover intriguing population structure across the invasive trajectory of an iconic invader
K Cheung, TG Amos, R Shine, JL DeVore, S Ducatez, RJ Edwards, ...
bioRxiv, 2023.09. 17.558141, 2023
2023
Chromosome-levelde novogenome assembly ofTelopea speciosissima(New South Wales waratah) using long-reads, linked-reads and Hi-C
SH Chen, M Rossetto, M van der Merwe, P Lu-Irving, JS Yap, H Sauquet, ...
2021
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Articles 1–16