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| The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience WJ Bug, GA Ascoli, JS Grethe, A Gupta, C Fennema-Notestine, AR Laird, ... Neuroinformatics 6, 175-194, 2008 | 182 | 2008 |
| OpenWorm: an open-science approach to modeling Caenorhabditis elegans B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ... Frontiers in computational neuroscience 8, 137, 2014 | 181 | 2014 |
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| Digital atlasing and standardization in the mouse brain M Hawrylycz, RA Baldock, A Burger, T Hashikawa, GA Johnson, ... PLoS computational biology 7 (2), e1001065, 2011 | 117 | 2011 |
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| NeuroLex. org: an online framework for neuroscience knowledge SD Larson, ME Martone Frontiers in neuroinformatics 7, 18, 2013 | 89 | 2013 |
| Open source brain: a collaborative resource for visualizing, analyzing, simulating, and developing standardized models of neurons and circuits P Gleeson, M Cantarelli, B Marin, A Quintana, M Earnshaw, S Sadeh, ... Neuron 103 (3), 395-411. e5, 2019 | 87 | 2019 |
| Ontologies for neuroscience: what are they and what are they good for? SD Larson, ME Martone Frontiers in neuroscience 3, 390, 2009 | 70 | 2009 |
| Development and use of ontologies inside the neuroscience information framework: a practical approach FT Imam, SD Larson, A Bandrowski, JS Grethe, A Gupta, ME Martone Frontiers in genetics 3, 111, 2012 | 65 | 2012 |
| c302: a multiscale framework for modelling the nervous system of Caenorhabditis elegans P Gleeson, D Lung, R Grosu, R Hasani, SD Larson Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 57 | 2018 |
| Towards a virtual C. elegans: A framework for simulation and visualization of the neuromuscular system in a 3D physical environment A Palyanov, S Khayrulin, SD Larson, A Dibert In silico biology 11 (3-4), 137-147, 2012 | 49 | 2012 |
| Application of smoothed particle hydrodynamics to modeling mechanisms of biological tissue A Palyanov, S Khayrulin, SD Larson Advances in Engineering Software 98, 1-11, 2016 | 47 | 2016 |
| Three-dimensional simulation of the Caenorhabditis elegans body and muscle cells in liquid and gel environments for behavioural analysis A Palyanov, S Khayrulin, SD Larson Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 37 | 2018 |
| A formal ontology of subcellular neuroanatomy SD Larson, LL Fong, A Gupta, C Condit, WJ Bug, ME Martone Frontiers in neuroinformatics 1, 98, 2007 | 35 | 2007 |
| Unit testing, model validation, and biological simulation GP Sarma, TW Jacobs, MD Watts, SV Ghayoomie, SD Larson, RC Gerkin F1000Research 5, 2016 | 31 | 2016 |
| A survey of the neuroscience resource landscape: perspectives from the neuroscience information framework J Cachat, A Bandrowski, JS Grethe, A Gupta, V Astakhov, F Imam, ... International review of neurobiology 103, 39-68, 2012 | 23 | 2012 |
| Microengineered 3D collagen gels with independently tunable fiber anisotropy and directionality A Ahmed, IM Joshi, S Larson, M Mansouri, S Gholizadeh, Z Allahyari, ... Advanced materials technologies 6 (4), 2001186, 2021 | 17 | 2021 |
| Arabidopsis bioinformatics resources: The current state, challenges, and priorities for the future International Arabidopsis Informatics Consortium, C Doherty, J Friesner, ... Plant Direct 3 (1), e00109, 2019 | 15 | 2019 |
| Connectome to behaviour: modelling Caenorhabditis elegans at cellular resolution SD Larson, P Gleeson, AEX Brown Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 15 | 2018 |
