Seuraa
Delasa Aghamirzaie
Delasa Aghamirzaie
Senior Bioinformatics Scientist at illumina
Vahvistettu sähköpostiosoite verkkotunnuksessa vt.edu
Nimike
Viittaukset
Viittaukset
Vuosi
Joint profiling of chromatin accessibility and gene expression in thousands of single cells
J Cao, DA Cusanovich, V Ramani, D Aghamirzaie, HA Pliner, AJ Hill, ...
Science 361 (6409), 1380-1385, 2018
7602018
A single-cell atlas of in vivo mammalian chromatin accessibility
DA Cusanovich, AJ Hill, D Aghamirzaie, RM Daza, HA Pliner, JB Berletch, ...
Cell 174 (5), 1309-1324. e18, 2018
6922018
Cicero predicts cis-regulatory DNA interactions from single-cell chromatin accessibility data
HA Pliner, JS Packer, JL McFaline-Figueroa, DA Cusanovich, RM Daza, ...
Molecular cell 71 (5), 858-871. e8, 2018
6002018
The cis-regulatory dynamics of embryonic development at single-cell resolution
DA Cusanovich, JP Reddington, DA Garfield, RM Daza, D Aghamirzaie, ...
Nature 555 (7697), 538-542, 2018
3422018
Metabolic and transcriptional reprogramming in developing soybean (Glycine max) embryos
E Collakova, D Aghamirzaie, Y Fang, C Klumas, F Tabataba, ...
Metabolites 3 (2), 347-372, 2013
732013
Potential targets of VIVIPAROUS1/ABI3‐LIKE1 (VAL1) repression in developing Arabidopsis thaliana embryos
A Schneider, D Aghamirzaie, H Elmarakeby, AN Poudel, AJ Koo, ...
The Plant Journal 85 (2), 305-319, 2016
622016
A machine learning approach to predict gene regulatory networks in seed development in Arabidopsis
Y Ni, D Aghamirzaie, H Elmarakeby, E Collakova, S Li, R Grene, ...
Frontiers in plant science 7, 222812, 2016
592016
Changes in RNA splicing in developing soybean (Glycine max) embryos
D Aghamirzaie, M Nabiyouni, Y Fang, C Klumas, LS Heath, R Grene, ...
Biology 2 (4), 1311-1337, 2013
302013
Transcriptome-wide functional characterization reveals novel relationships among differentially expressed transcripts in developing soybean embryos.
D Aghamirzaie, D Batra, LS Heath, A Schneider, R Grene, E Collakova
BMC Genomics, 2015
212015
Expresso: a database and web server for exploring the interaction of transcription factors and their target genes in Arabidopsis thaliana using ChIP-Seq peak data
D Aghamirzaie, KR Velmurugan, S Wu, D Altarawy, LS Heath, R Grene
F1000Research 6, 2017
152017
CoSpliceNet: a framework for co-splicing network inference from transcriptomics data
D Aghamirzaie, E Collakova, S Li, R Grene
BMC Genomics, 2016
152016
A highly parallel multi-class pattern classification on gpu
M Nabiyouni, D Aghamirzaie
2012 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid …, 2012
112012
Reduction of process variation effect on FPGAs using multiple configurations
D Aghamirzaie, SA Razavi, MS Zamani, M Nabiyouni
2010 18th IEEE/IFIP International Conference on VLSI and System-on-Chip, 85-90, 2010
32010
Induction of GLUTAMINE DUMPER1 reveals a link between amino acid export, abscisic acid, and immune responses
S Yu, D Aghamirzaie, K Harich, E Collakova, R Grene, G Pilot
bioRxiv, 2020.09. 23.310615, 2020
2020
Reviewers for Bioinformatics and Biology Insights: 2018
AK Shasany, A Ten Have, A Onan, S Beier, D Cheek, D Aghamirzaie, ...
Bioinformatics and Biology Insights 13, 1, 2019
2019
Expresso: A database and web server for exploring the interaction of transcription factors and their target genes in Arabidopsis thaliana using ChIP-Seq peak data
F1000 6 (372), 2017
2017
Isoform-Specific Expression During Embryo Development in Arabidopsis and Soybean
D Aghamirzaie
Virginia Tech, 2016
2016
Metabolic and Transcriptional Reprogramming in Developing Soybean (Glycine max) Embryos
R Grene, LS Heath, E Myers, F Tabataba, A Kakumanu, C Klumas, ...
2013
Changes in RNA Splicing in Soybean Seed Embryos
D Aghamirzaie, L Heath, R Grene, E Collakova
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Artikkelit 1–19