| A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding R Akbar, PA Robert, M Pavlović, JR Jeliazkov, I Snapkov, A Slabodkin, ... Cell Reports 34 (11), 2021 | 150 | 2021 |
| In silico proof of principle of machine learning-based antibody design at unconstrained scale R Akbar, PA Robert, CR Weber, M Widrich, R Frank, M Pavlović, ... MAbs 14 (1), 2031482, 2022 | 83 | 2022 |
| The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires M Pavlović, L Scheffer, K Motwani, C Kanduri, R Kompova, N Vazov, ... Nature Machine Intelligence 3 (11), 936-944, 2021 | 59 | 2021 |
| Unconstrained generation of synthetic antibody–antigen structures to guide machine learning methodology for antibody specificity prediction PA Robert, R Akbar, R Frank, M Pavlović, M Widrich, I Snapkov, ... Nature Computational Science 2 (12), 845-865, 2022 | 53* | 2022 |
| Individualized VDJ recombination predisposes the available Ig sequence space A Slabodkin, M Chernigovskaya, I Mikocziova, R Akbar, L Scheffer, ... Genome Research 31 (12), 2209-2224, 2021 | 30 | 2021 |
| Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning M Chernigovskaya, M Pavlović, C Kanduri, S Gielis, PA Robert, L Scheffer, ... bioRxiv, 2023.10. 20.562936, 2023 | 1 | 2023 |
| Weakly supervised identification and generation of adaptive immune receptor sequences associated with immune disease status A Slabodkin, LM Sollid, GK Sandve, PA Robert, V Greiff bioRxiv, 2023.09. 24.558823, 2023 | 1 | 2023 |
| MHC heterozygosity reduces the T cell receptor repertoire A Brown, J White, L Shaw, J Gross, A Slabodkin, E Kushner, V Greiff, ... Available at SSRN 4555926, 0 | 1 | |
| Baselining the Buzz. Trastuzumab-HER2 Affinity, and Beyond! L Chinery, AM Hummer, BB Mehta, R Akbar, P Rawat, A Slabodkin, ... bioRxiv, 2024.03. 26.586756, 2024 | | 2024 |
| Atypical memory B cells form a pre-plasmacellular reservoir for steady-state IgD responses to common nasopharyngeal antigens R Tachó-Piñot, H Bashour, M Filipska, S Tejedor-Vaquero, ... bioRxiv, 2023.08. 29.554748, 2023 | | 2023 |
| A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding E Miho, R Akbar, M Pavlovic, I Snapkov, A Slabodkin, L Scheffer, IH Haff, ... Cell Reports, 2021 | | 2021 |
