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Juhana I Kammonen
Juhana I Kammonen
PhD student
Verified email at helsinki.fi - Homepage
Title
Cited by
Cited by
Year
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch
J Salojärvi, OP Smolander, K Nieminen, S Rajaraman, O Safronov, ...
Nature genetics 49 (6), 904-912, 2017
2562017
Complete genome sequence of Propionibacterium freudenreichii DSM 20271T
P Koskinen, P Deptula, OP Smolander, F Tamene, J Kammonen, ...
Standards in genomic sciences 10, 1-6, 2015
332015
Sealed in a lake—Biology and conservation of the endangered Saimaa ringed seal: A review
M Kunnasranta, M Niemi, M Auttila, M Valtonen, J Kammonen, T Nyman
Biological Conservation 253, 108908, 2021
322021
Bracketing phenogenotypic limits of mammalian hybridization
Y Savriama, M Valtonen, JI Kammonen, P Rastas, OP Smolander, ...
Royal society open science 5 (11), 180903, 2018
322018
Modelling a Neolithic population bottleneck in Finland: a genetic simulation
T Sundell, M Heger, J Kammonen, P Onkamo
Fennoscandia Archaeologica, 2010
182010
Archaeology, genetics and a population bottleneck in prehistoric Finland
T Sundell, J Kammonen, P Halinen, P Pesonen, P Onkamo
Antiquity 88 (342), 1132-1147, 2014
162014
gapFinisher: a reliable gap filling pipeline for SSPACE-LongRead scaffolder output
JI Kammonen, OP Smolander, L Paulin, PAB Pereira, P Laine, ...
Plos one 14 (9), e0216885, 2019
152019
Bayesian spatiotemporal analysis of radiocarbon dates from eastern Fennoscandia
P Onkamo, J Kammonen, P Pesonen, T Sundell, E Moltchanova, ...
Radiocarbon 54 (3-4), 649-659, 2012
112012
Bayesian spatial analysis of archaeological finds and radiocarbon dates: an example from Finland 4000–3500 cal BC
J Kammonen, T Sundell, E Moltchanova, P Pesonen, M Oinonen, ...
Revive the Past, Proceedings of the 39th Conference in Computer Applications …, 2012
102012
Archaeological radiocarbon dates and ancient shorelines-resources and reservoirs
P Pesonen, J Kammonen, E Moltchanova, M Oinonen, P Onkamo
Proceedings of the seminar “The Sea Level Displacement and Bedrock Uplift …, 2011
102011
Fragmented habitat compensates for the adverse effects of genetic bottleneck
A Löytynoja, P Rastas, M Valtonen, J Kammonen, L Holm, MT Olsen, ...
Current Biology 33 (6), 1009-1018. e7, 2023
72023
Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density …
OP Smolander, D Blande, V Ahola, P Rastas, J Tanskanen, JI Kammonen, ...
GigaScience 11, giab097, 2022
52022
Retracing prehistoric population events in Finland using simulation
T Sundell, J Kammonen, M Heger, JU Palo, P Onkamo, G Earl, T Sly, ...
52013
Improving the throughput of the forward population genetic simulation environment simuPOP
J Kammonen
Unpublished MSc thesis, Department of Computer Science, University of Helsinki, 2013
42013
Author Correction: Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch
J Salojärvi, OP Smolander, K Nieminen, S Rajaraman, O Safronov, ...
Nature Genetics 51 (7), 1187-1189, 2019
32019
Bracketing phenotypic limits of mammalian hybridization
Y Savriama, M Valtonen, J Kammonen, P Rastas, OP Smolander, ...
BioRXiv, 310789, 2018
32018
An evolutionarily distinct ringed seal in the Ilulissat Icefjord
A Rosing‐Asvid, A Löytynoja, P Momigliano, RG Hansen, ...
Molecular ecology 32 (22), 5932-5943, 2023
22023
Genomic evidence uncovers inbreeding and supports translocations in rescuing the genetic diversity of a landlocked seal population
T Sundell, JI Kammonen, E Mustanoja, V Biard, M Kunnasranta, M Niemi, ...
Conservation Genetics 24 (2), 155-165, 2023
22023
Principal Component Analysis of Archaeological Data
J Kammonen, T Sundell
CAA2015, 81, 2016
22016
Increased transcriptome sequencing efficiency with modified Mint-2 digestion–ligation protocol
JI Kammonen, OP Smolander, T Sipilä, K Overmyer, P Auvinen, L Paulin
Analytical biochemistry 477, 38-40, 2015
22015
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