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Bala Krishnamoorthy
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Development of a four-body statistical pseudo-potential to discriminate native from non-native protein conformations
B Krishnamoorthy, A Tropsha
Bioinformatics 19 (12), 1540-1548, 2003
1562003
Optimal homologous cycles, total unimodularity, and linear programming
TK Dey, AN Hirani, B Krishnamoorthy
Proceedings of the forty-second ACM symposium on Theory of computing, 221-230, 2010
1462010
Four-body scoring function for mutagenesis
C Deutsch, B Krishnamoorthy
Bioinformatics 23 (22), 3009-3015, 2007
582007
Column basis reduction and decomposable knapsack problems
B Krishnamoorthy, G Pataki
Discrete Optimization 6 (3), 242-270, 2009
432009
Scoring function to predict solubility mutagenesis
Y Tian, C Deutsch, B Krishnamoorthy
Algorithms for molecular biology 5, 1-11, 2010
322010
Continuous toolpath planning in a graphical framework for sparse infill additive manufacturing
P Gupta, B Krishnamoorthy, G Dreifus
Computer-Aided Design 127, 102880, 2020
302020
Bounds on the size of branch-and-bound proofs for integer knapsacks
B Krishnamoorthy
Operations Research Letters 36 (1), 19-25, 2008
282008
Considerations for waste gasification as an alternative to landfilling in Washington state using decision analysis and optimization
P Behrend, B Krishnamoorthy
Sustainable Production and Consumption 12, 170-179, 2017
232017
Neck muscle paths and moment arms are significantly affected by wrapping surface parameters
BL Suderman, B Krishnamoorthy, AN Vasavada
Computer methods in biomechanics and biomedical engineering 15 (7), 735-744, 2012
232012
Topological features in cancer gene expression data
S Lockwood, B Krishnamoorthy
Pacific Symposium on Biocomputing Co-Chairs, 108-119, 2014
192014
Neighborhood properties are important determinants of temperature sensitive mutations
S Lockwood, B Krishnamoorthy, P Ye
PloS one 6 (12), e28507, 2011
172011
Hyppo-X: A Scalable Exploratory Framework for Analyzing Complex Phenomics Data
M Kamruzzaman, A Kalyanaraman, B Krishnamoorthy, S Hey, P Schnable
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2019
16*2019
A topological characterization of protein structure
B Krishnamoorthy, S Provan, A Tropsha
Data Mining in Biomedicine, 431-455, 2007
152007
Simplicial flat norm with scale
S Ibrahim, B Krishnamoorthy, KR Vixie
Journal of Computational Geometry 4 (1), 133-159, 2013
142013
Detecting divergent subpopulations in phenomics data using interesting flares
M Kamruzzaman, A Kalyanaraman, B Krishnamoorthy
Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018
132018
Representations of energy landscapes by sublevelset persistent homology: An example with n-alkanes
J Mirth, Y Zhai, J Bush, EG Alvarado, H Jordan, M Heim, ...
The Journal of Chemical Physics 154 (11), 2021
122021
Interesting paths in the mapper complex
BK Ananth Kalyanaraman, Methun Kamruzzaman
Journal of computational Geometry 10 (1), 500-531, 2019
11*2019
Edge contractions and simplicial homology
TK Dey, AN Hirani, B Krishnamoorthy, G Smith
arXiv preprint arxiv:1304.0664, 2013
112013
A Knapsack-Like Code Using Recurrence Sequence Representations
WW Nathan Hamlin, Bala Krishnamoorthy
Fibonacci Quarterly 53 (1), 24-33, 2015
10*2015
Pheno-Mapper: an interactive toolbox for the visual exploration of phenomics data
Y Zhou, M Kamruzzaman, P Schnable, B Krishnamoorthy, ...
Proceedings of the 12th ACM Conference on Bioinformatics, Computational …, 2021
82021
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