Isheng Jason Tsai
Isheng Jason Tsai
Biodiversity research center, Academia Sinica
Verified email at gate.sinica.edu.tw - Homepage
Title
Cited by
Cited by
Year
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337-341, 2009
14082009
The genomes of four tapeworm species reveal adaptations to parasitism
IJ Tsai, M Zarowiecki, N Holroyd, A Garciarrubio, A Sanchez-Flores, ...
Nature 496 (7443), 57-63, 2013
5582013
A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni
AV Protasio, IJ Tsai, A Babbage, S Nichol, M Hunt, MA Aslett, N De Silva, ...
PLoS Negl Trop Dis 6 (1), e1455, 2012
3552012
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus
T Kikuchi, JA Cotton, JJ Dalzell, K Hasegawa, N Kanzaki, P McVeigh, ...
PLoS Pathog 7 (9), e1002219, 2011
3292011
Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps
IJ Tsai, TD Otto, M Berriman
Genome biology 11 (4), 1-9, 2010
3172010
Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle
IJ Tsai, D Bensasson, A Burt, V Koufopanou
Proceedings of the National Academy of Sciences 105 (12), 4957-4962, 2008
2942008
The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery
R Laing, T Kikuchi, A Martinelli, IJ Tsai, RN Beech, E Redman, N Holroyd, ...
Genome biology 14 (8), 1-16, 2013
2532013
A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
MT Swain, IJ Tsai, SA Assefa, C Newbold, M Berriman, TD Otto
Nature protocols 7 (7), 1260-1284, 2012
1992012
The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode
JA Cotton, CJ Lilley, LM Jones, T Kikuchi, AJ Reid, P Thorpe, IJ Tsai, ...
Genome biology 15 (3), 1-17, 2014
1782014
The genomic basis of parasitism in the Strongyloides clade of nematodes
VL Hunt, IJ Tsai, A Coghlan, AJ Reid, N Holroyd, BJ Foth, A Tracey, ...
Nature genetics 48 (3), 299-307, 2016
1562016
Comparative genomics of the major parasitic worms
International Helminth Genomes Consortium
Nature genetics 51 (1), 163, 2019
1322019
Whipworm genome and dual-species transcriptome analyses provide molecular insights into an intimate host-parasite interaction
BJ Foth, IJ Tsai, AJ Reid, AJ Bancroft, S Nichol, A Tracey, N Holroyd, ...
Nature genetics 46 (7), 693-700, 2014
1102014
Conversion from mouse embryonic to extra-embryonic endoderm stem cells reveals distinct differentiation capacities of pluripotent stem cell states
LTY Cho, SE Wamaitha, IJ Tsai, J Artus, RI Sherwood, RA Pedersen, ...
Development, 2012
762012
The genome of Onchocerca volvulus, agent of river blindness
JA Cotton, S Bennuru, A Grote, B Harsha, A Tracey, R Beech, SR Doyle, ...
Nature microbiology 2 (2), 1-12, 2016
702016
Conservation of recombination hotspots in yeast
IJ Tsai, A Burt, V Koufopanou
Proceedings of the National Academy of Sciences 107 (17), 7847-7852, 2010
702010
Germline transgenesis and insertional mutagenesis in Schistosoma mansoni mediated by murine leukemia virus
G Rinaldi, SE Eckert, IJ Tsai, S Suttiprapa, KJ Kines, JF Tort, VH Mann, ...
PLoS Pathog 8 (7), e1002820, 2012
622012
Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi
JE Palomares-Rius, Y Hirooka, IJ Tsai, H Masuya, A Hino, N Kanzaki, ...
BMC evolutionary biology 14 (1), 1-12, 2014
402014
Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution
SM Chaw, YC Liu, YW Wu, HY Wang, CYI Lin, CS Wu, HM Ke, LY Chang, ...
Nature plants 5 (1), 63-73, 2019
382019
Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
N Kanzaki, IJ Tsai, R Tanaka, VL Hunt, D Liu, K Tsuyama, Y Maeda, ...
Nature communications 9 (1), 1-12, 2018
382018
Assessment of helminth biodiversity in wild rats using 18S rDNA based metagenomics
R Tanaka, A Hino, IJ Tsai, JE Palomares-Rius, A Yoshida, Y Ogura, ...
PloS one 9 (10), e110769, 2014
362014
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Articles 1–20