| Bayesian analysis of genetic differentiation between populations J Corander, P Waldmann, MJ Sillanpää Genetics 163 (1), 367-374, 2003 | 876 | 2003 |
| The Collaborative Cross, a community resource for the genetic analysis of complex traits GA Churchill, DC Airey, H Allayee, JM Angel, AD Attie, J Beatty, ... Nature genetics 36 (11), 1133, 2004 | 853 | 2004 |
| A review of Bayesian variable selection methods: what, how and which RB O'Hara, MJ Sillanpää Bayesian analysis 4 (1), 85-117, 2009 | 610 | 2009 |
| BAPS 2: enhanced possibilities for the analysis of genetic population structure J Corander, P Waldmann, P Marttinen, MJ Sillanpää Bioinformatics 20 (15), 2363-2369, 2004 | 479 | 2004 |
| Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities A Jolma, T Kivioja, J Toivonen, L Cheng, G Wei, M Enge, M Taipale, ... Genome research 20 (6), 861-873, 2010 | 357 | 2010 |
| Bayesian mapping of multiple quantitative trait loci from incomplete inbred line cross data MJ Sillanpää, E Arjas Genetics 148 (3), 1373-1388, 1998 | 329 | 1998 |
| Bayesian mapping of multiple quantitative trait loci from incomplete outbred offspring data MJ Sillanpää, E Arjas Genetics 151 (4), 1605-1619, 1999 | 166 | 1999 |
| Model choice in gene mapping: what and why MJ Sillanpää, J Corander Trends in Genetics 18 (6), 301-307, 2002 | 139 | 2002 |
| Multiple QTL mapping in related plant populations via a pedigree-analysis approach M Bink, P Uimari, M Sillanpää, L Janss, R Jansen Theoretical and Applied Genetics 104 (5), 751-762, 2002 | 107 | 2002 |
| Genetic basis of climatic adaptation in Scots pine by Bayesian quantitative trait locus analysis P Hurme, MJ Sillanpää, E Arjas, T Repo, O Savolainen Genetics 156 (3), 1309-1322, 2000 | 91 | 2000 |
| Bayesian mapping of genotype× expression interactions in quantitative and qualitative traits F Hoti, MJ Sillanpää Heredity 97 (1), 4-18, 2006 | 78 | 2006 |
| Overview of LASSO-related penalized regression methods for quantitative trait mapping and genomic selection Z Li, MJ Sillanpää Theoretical and applied genetics 125 (3), 419-435, 2012 | 77 | 2012 |
| Genetic basis of adaptation: flowering time in Arabidopsis thaliana H Kuittinen, MJ Sillanpää, O Savolainen Theoretical and Applied Genetics 95 (4), 573-583, 1997 | 67 | 1997 |
| Overview of techniques to account for confounding due to population stratification and cryptic relatedness in genomic data association analyses MJ Sillanpää Heredity 106 (4), 511-519, 2011 | 65 | 2011 |
| Replication in genetic studies of complex traits MJ Sillanpää, K Auranen Annals of human genetics 68 (6), 646-657, 2004 | 63 | 2004 |
| Extended Bayesian LASSO for multiple quantitative trait loci mapping and unobserved phenotype prediction CM Mutshinda, MJ Sillanpää Genetics 186 (3), 1067-1075, 2010 | 60 | 2010 |
| Back to basics for Bayesian model building in genomic selection HP Kärkkäinen, MJ Sillanpää Genetics 191 (3), 969-987, 2012 | 52 | 2012 |
| Bayesian versus frequentist analysis of multiple quantitative trait loci with an application to an outbred apple cross C Maliepaard, MJ Sillanpää, JW Van Ooijen, RC Jansen, E Arjas Theoretical and applied genetics 103 (8), 1243-1253, 2001 | 51 | 2001 |
| Across breed multi‐trait random regression genomic predictions in the N ordic R ed dairy cattle ML Makgahlela, EA Mäntysaari, I Strandén, M Koivula, US Nielsen, ... Journal of animal breeding and genetics 130 (1), 10-19, 2013 | 46 | 2013 |
| Bayesian oligogenic analysis of quantitative and qualitative traits in general pedigrees P Uimari, MJ Sillanpää Genetic Epidemiology: The Official Publication of the International Genetic …, 2001 | 45 | 2001 |
