| Seeing the wood for the trees: a forest of methods for optimisation and omic-network integration in metabolic modelling S Vijayakumar, M Conway, P Lió, C Angione Briefings in Bioinformatics, 2017 | 103* | 2017 |
| Robust design of microbial strains J Costanza, G Carapezza, C Angione, P Lió, G Nicosia Bioinformatics 28 (23), 3097-3104, 2012 | 59 | 2012 |
| Machine and deep learning meet genome-scale metabolic modelling G Zampieri, S Vijayakumar, E Yaneske, C Angione PLoS Computational Biology 15 (7), e1007084, 2019 | 54 | 2019 |
| Multiplex methods provide effective integration of multi-omic data in genome-scale models C Angione, M Conway, P Lió BMC bioinformatics 17 (4), 257-269, 2016 | 48 | 2016 |
| Predictive analytics of environmental adaptability in multi-omic network models C Angione, P Lió Scientific reports 5, 2015 | 46 | 2015 |
| Making life difficult for Clostridium difficile: augmenting the pathogen’s metabolic model with transcriptomic and codon usage data for better therapeutic target characterization SS Kashaf, C Angione, P Lió BMC systems biology 11 (1), 1-13, 2017 | 19 | 2017 |
| Making life difficult for Clostridium difficile: augmenting the pathogen’s metabolic model with transcriptomic and codon usage data for better therapeutic target characterization SS Kashaf, C Angione, P Lió BMC systems biology 11 (1), 1-13, 2017 | 19 | 2017 |
| Computational Methods in Systems Biology L Cardelli, J Despeyroux, R Grosu, J Hillston, E Bartocci, P Liň, N Paole, ... | 19 | 2016 |
| A hybrid of metabolic flux analysis and bayesian factor modeling for multiomic temporal pathway activation C Angione, N Pratanwanich, P Lió ACS synthetic biology 4 (8), 880-889, 2015 | 19 | 2015 |
| Pareto optimality in organelle energy metabolism analysis C Angione, G Carapezza, J Costanza, P Lió, G Nicosia IEEE/ACM transactions on computational biology and bioinformatics 10 (4 …, 2013 | 17 | 2013 |
| Human Systems Biology and Metabolic Modelling: A Review—From Disease Metabolism to Precision Medicine C Angione BioMed Research International 2019, 2019 | 16 | 2019 |
| Integrating splice-isoform expression into genome-scale models characterizes breast cancer metabolism C Angione Bioinformatics 34 (3), 494–501, 2018 | 16 | 2018 |
| Bioinformatics Challenges and Potentialities in Studying Extreme Environments C Angione, P Liň, S Pucciarelli, B Can, M Conway, M Lotti, H Bokhari, ... International Meeting on Computational Intelligence Methods for …, 2016 | 14* | 2016 |
| Multi-target analysis and design of mitochondrial metabolism C Angione, J Costanza, G Carapezza, P Lió, G Nicosia PloS one 10 (9), e0133825, 2015 | 14 | 2015 |
| Optimization of multi-omic genome-scale models: Methodologies, hands-on tutorial, and perspectives S Vijayakumar, M Conway, P Lió, C Angione Metabolic Network Reconstruction and Modeling, 389-408, 2018 | 12 | 2018 |
| Optimization of Multi-Omic Genome-Scale Models: Methodologies, Hands-on Tutorial, and Perspectives S Vijayakumar, M Conway, P Lió, C Angione Metabolic Network Reconstruction and Modeling, 389-408, 2018 | 12 | 2018 |
| Bioremediation in marine ecosystems: a computational study combining ecological modelling and flux balance analysis M Taffi, N Paoletti, C Angione, S Pucciarelli, M Marini, P Lió Frontiers in Genetics 5 (319), 2014 | 12 | 2014 |
| Efficient behavior of photosynthetic organelles via Pareto optimality, identifiability, and sensitivity analysis G Carapezza, R Umeton, J Costanza, C Angione, G Stracquadanio, ... ACS synthetic biology 2 (5), 274-288, 2013 | 12 | 2013 |
| Situating Agent-Based Modelling in Population Health Research E Silverman, U Gostoli, S Picascia, J Almagor, M McCann, R Shaw, ... arXiv preprint arXiv:2002.02345, 2020 | 11 | 2020 |
| The poly-omics of ageing through individual-based metabolic modelling E Yaneske, C Angione BMC Bioinformatics 19 (14), 415, 2018 | 11 | 2018 |
P. Lió, Pietro Lio, P. Lio, Pietro Liň, Pie...University of CambridgeVerified email at cam.ac.uk
