Charlotte Deane
Charlotte Deane
Professor of Structural Bioinformatics, Oxford University
Verified email at - Homepage
Cited by
Cited by
Protein interactions: two methods for assessment of the reliability of high throughput observations
CM Deane, Ł Salwinski, I Xenarios, D Eisenberg
Molecular & Cellular Proteomics 1 (5), 349-356, 2002
HOMSTRAD: a database of protein structure alignments for homologous families
K Mizuguchi, CM Deane, TL Blundell, JP Overington
Protein science 7 (11), 2469-2471, 1998
JOY: protein sequence-structure representation and analysis.
K Mizuguchi, CM Deane, TL Blundell, MS Johnson, JP Overington
Bioinformatics (Oxford, England) 14 (7), 617-623, 1998
Reduced amounts and abnormal forms of phospholipase C zeta (PLCζ) in spermatozoa from infertile men
E Heytens, J Parrington, K Coward, C Young, S Lambrecht, SY Yoon, ...
Human Reproduction 24 (10), 2417-2428, 2009
SAbDab: the structural antibody database
J Dunbar, K Krawczyk, J Leem, T Baker, A Fuchs, G Georges, J Shi, ...
Nucleic acids research 42 (D1), D1140-D1146, 2014
Synonymous codon usage influences the local protein structure observed
R Saunders, CM Deane
Nucleic acids research 38 (19), 6719-6728, 2010
FREAD revisited: accurate loop structure prediction using a database search algorithm
Y Choi, CM Deane
Proteins: Structure, Function, and Bioinformatics 78 (6), 1431-1440, 2010
Freely available conformer generation methods: how good are they?
JP Ebejer, GM Morris, CM Deane
Journal of chemical information and modeling 52 (5), 1146-1158, 2012
CODA: a combined algorithm for predicting the structurally variable regions of protein models
CM Deane, TL Blundell
Protein Science 10 (3), 599-612, 2001
A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density
NM Pearce, T Krojer, AR Bradley, P Collins, RP Nowak, R Talon, ...
Nature communications 8 (1), 1-8, 2017
ANARCI: antigen receptor numbering and receptor classification
J Dunbar, CM Deane
Bioinformatics 32 (2), 298-300, 2016
CoV-AbDab: the coronavirus antibody database
MIJ Raybould, A Kovaltsuk, C Marks, CM Deane
Bioinformatics 37 (5), 734-735, 2021
Revisiting date and party hubs: novel approaches to role assignment in protein interaction networks
S Agarwal, CM Deane, MA Porter, NS Jones
PLoS computational biology 6 (6), e1000817, 2010
Five computational developability guidelines for therapeutic antibody profiling
MIJ Raybould, C Marks, K Krawczyk, B Taddese, J Nowak, AP Lewis, ...
Proceedings of the National Academy of Sciences 116 (10), 4025-4030, 2019
Avoiding false positive conclusions in molecular simulation: the importance of replicas
B Knapp, L Ospina, CM Deane
Journal of Chemical Theory and Computation 14 (12), 6127-6138, 2018
ABodyBuilder: Automated antibody structure prediction with data–driven accuracy estimation
J Leem, J Dunbar, G Georges, J Shi, CM Deane
MAbs 8 (7), 1259-1268, 2016
A maternally inherited autosomal point mutation in human phospholipase C zeta (PLCζ) leads to male infertility
J Kashir, M Konstantinidis, C Jones, B Lemmon, H Chang Lee, R Hamer, ...
Human reproduction 27 (1), 222-231, 2012
A microtubule interactome: complexes with roles in cell cycle and mitosis
JR Hughes, AM Meireles, KH Fisher, A Garcia, PR Antrobus, A Wainman, ...
PLoS biology 6 (4), e98, 2008
Improving B-cell epitope prediction and its application to global antibody-antigen docking
K Krawczyk, X Liu, T Baker, J Shi, CM Deane
Bioinformatics 30 (16), 2288-2294, 2014
The function of communities in protein interaction networks at multiple scales
ACF Lewis, NS Jones, MA Porter, CM Deane
BMC systems biology 4 (1), 1-14, 2010
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