| What is stress? Dose-response effects in commonly used in vitro stress assays H Claeys, S Van Landeghem, M Dubois, K Maleux, D Inzé Plant physiology 165 (2), 519-527, 2014 | 241 | 2014 |
| Large-scale event extraction from literature with multi-level gene normalization S Van Landeghem, J Björne, CH Wei, K Hakala, S Pyysalo, S Ananiadou, ... PloS one 8 (4), e55814, 2013 | 132 | 2013 |
| pico‐PLAZA, a genome database of microbial photosynthetic eukaryotes K Vandepoele, M Van Bel, G Richard, S Van Landeghem, B Verhelst, ... Environmental microbiology 15 (8), 2147-2153, 2013 | 92 | 2013 |
| Extracting protein-protein interactions from text using rich feature vectors and feature selection S Van Landeghem, Y Saeys, B De Baets, Y Van de Peer Proceedings of the Third International Symposium on Semantic Mining in …, 2008 | 86 | 2008 |
| EVEX in ST’13: Application of a large-scale text mining resource to event extraction and network construction K Hakala, S Van Landeghem, T Salakoski, Y Van de Peer, F Ginter Proceedings of the BioNLP shared task 2013 workshop, 26-34, 2013 | 56 | 2013 |
| Discriminative and informative features for biomolecular text mining with ensemble feature selection S Van Landeghem, T Abeel, Y Saeys, Y Van de Peer Bioinformatics 26 (18), i554-i560, 2010 | 53 | 2010 |
| Exploring biomolecular literature with EVEX: connecting genes through events, homology, and indirect associations S Van Landeghem, K Hakala, S Rönnqvist, T Salakoski, Y Van de Peer, ... Advances in bioinformatics 2012 (1), 582765, 2012 | 50 | 2012 |
| EVEX: a PubMed-scale resource for homology-based generalization of text mining predictions S Van Landeghem, F Ginter, Y Van de Peer, T Salakoski Proceedings of BioNLP 2011 workshop, 28-37, 2011 | 50 | 2011 |
| Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks SV Landeghem, TV Parys, M Dubois, D Inzé, YV de Peer BMC bioinformatics 17, 1-12, 2016 | 44 | 2016 |
| The Potential of Text Mining in Data Integration and Network Biology for Plant Research: A Case Study on Arabidopsis S Van Landeghem, S De Bodt, ZJ Drebert, D Inzé, Y Van de Peer The Plant Cell 25 (3), 794-807, 2013 | 42 | 2013 |
| Analyzing text in search of bio-molecular events: a high-precision machine learning framework S Van Landeghem, Y Saeys, B De Baets, Y Van de Peer Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task …, 2009 | 35 | 2009 |
| Cell line name recognition in support of the identification of synthetic lethality in cancer from text S Kaewphan, S Van Landeghem, T Ohta, Y Van de Peer, F Ginter, ... Bioinformatics 32 (2), 276-282, 2016 | 31 | 2016 |
| Semantically linking molecular entities in literature through entity relationships S Van Landeghem, J Björne, T Abeel, B De Baets, T Salakoski, ... BMC bioinformatics 13, 1-9, 2012 | 25 | 2012 |
| U-Compare bio-event meta-service: compatible BioNLP event extraction services Y Kano, J Björne, F Ginter, T Salakoski, E Buyko, U Hahn, KB Cohen, ... BMC bioinformatics 12, 1-9, 2011 | 23 | 2011 |
| PubMed-scale event extraction for post-translational modifications, epigenetics and protein structural relations J Björne, S Van Landeghem, S Pyysalo, T Ohta, F Ginter, Y Van de Peer, ... BioNLP: Proceedings of the 2012 Workshop on Biomedical Natural Language …, 2012 | 14 | 2012 |
| The KnownLeaf literature curation system captures knowledge about Arabidopsis leaf growth and development and facilitates integrated data mining D Szakonyi, S Van Landeghem, K Baerenfaller, L Baeyens, J Blomme, ... Current Plant Biology 2, 1-11, 2015 | 13 | 2015 |
| Integration of static relations to enhance event extraction from text S Van Landeghem, S Pyysalo, T Ohta, Y Van de Peer Proceedings of the 2010 Workshop on Biomedical Natural Language Processing …, 2010 | 12 | 2010 |
| Integrating large-scale text mining and co-expression networks: Targeting NADP (H) metabolism in E. coli with event extraction S Kaewphan, S Kreula, S Van Landeghem, Y Van de Peer, P Jones, ... Proceedings of the Third Workshop on Building and Evaluating Resources for …, 2012 | 11 | 2012 |
| High‐precision bio‐molecular event extraction from text using parallel binary classifiers S Van Landeghem, B De Baets, Y Van de Peer, Y Saeys Computational Intelligence 27 (4), 645-664, 2011 | 10 | 2011 |
| Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis K Hakala, S Van Landeghem, T Salakoski, Y Van de Peer, F Ginter BMC bioinformatics 16, 1-12, 2015 | 9 | 2015 |
Yves Van de PeerProfessor in Bioinformatics and Genome Biology, Ghent University, BelgiumVerified email at psb.ugent.be
