Juan C. Caicedo
Juan C. Caicedo
Broad Institute of MIT and Harvard
Verified email at broad.mit.edu - Homepage
Title
Cited by
Cited by
Year
Flickr30k entities: Collecting region-to-phrase correspondences for richer image-to-sentence models
BA Plummer, L Wang, CM Cervantes, JC Caicedo, J Hockenmaier, ...
Proceedings of the IEEE international conference on computer vision, 2641-2649, 2015
7552015
CellProfiler 3.0: Next-generation image processing for biology
C McQuin, A Goodman, V Chernyshev, L Kamentsky, BA Cimini, ...
PLoS biology 16 (7), e2005970, 2018
7412018
Active object localization with deep reinforcement learning
JC Caicedo, S Lazebnik
Proceedings of the IEEE international conference on computer vision, 2488-2496, 2015
3932015
Data-analysis strategies for image-based cell profiling
JC Caicedo, S Cooper, F Heigwer, S Warchal, P Qiu, C Molnar, ...
Nature methods 14 (9), 849-863, 2017
3002017
Histopathology image classification using bag of features and kernel functions
JC Caicedo, A Cruz, FA Gonzalez
Conference on Artificial Intelligence in Medicine in Europe, 126-135, 2009
2142009
Visual pattern mining in histology image collections using bag of features
A Cruz-Roa, JC Caicedo, FA González
Artificial intelligence in medicine 52 (2), 91-106, 2011
1632011
Fine-tuning Deep Convolutional Networks for Plant Recognition.
AK Reyes, JC Caicedo, JE Camargo
CLEF (Working Notes) 1391, 467-475, 2015
1622015
Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl
JC Caicedo, A Goodman, KW Karhohs, BA Cimini, J Ackerman, ...
Nature methods 16 (12), 1247-1253, 2019
1512019
Evaluation of deep learning strategies for nucleus segmentation in fluorescence images
JC Caicedo, J Roth, A Goodman, T Becker, KW Karhohs, M Broisin, ...
Cytometry Part A 95 (9), 952-965, 2019
1322019
Applications in image-based profiling of perturbations
JC Caicedo, S Singh, AE Carpenter
Current Opinion in Biotechnology 39, 134–142, 2016
972016
Multimodal representation, indexing, automated annotation and retrieval of image collections via non-negative matrix factorization
JC Caicedo, J BenAbdallah, FA González, O Nasraoui
Neurocomputing 76 (1), 50-60, 2012
782012
Content-based histopathology image retrieval using a kernel-based semantic annotation framework
JC Caicedo, FA González, E Romero
Journal of biomedical informatics 44 (4), 519-528, 2011
772011
Collaborative personalization of image enhancement
JC Caicedo, A Kapoor, SB Kang
CVPR 2011, 249-256, 2011
552011
nucleAIzer: a parameter-free deep learning framework for nucleus segmentation using image style transfer
R Hollandi, A Szkalisity, T Toth, E Tasnadi, C Molnar, B Mathe, I Grexa, ...
Cell Systems 10 (5), 453-458. e6, 2020
512020
Automating morphological profiling with generic deep convolutional networks
N Pawlowski, JC Caicedo, S Singh, AE Carpenter, A Storkey
BioRxiv, 085118, 2016
412016
A semantic content-based retrieval method for histopathology images
JC Caicedo, FA Gonzalez, E Romero
Asia Information Retrieval Symposium, 51-60, 2008
412008
Design of a medical image database with content-based retrieval capabilities
JC Caicedo, FA Gonzalez, E Triana, E Romero
Pacific-Rim Symposium on Image and Video Technology, 919-931, 2007
35*2007
Combining visual features and text data for medical image retrieval using latent semantic kernels
JC Caicedo, JG Moreno, EA Niño, FA González
Proceedings of the international conference on Multimedia information …, 2010
342010
Combining low-level features for improved classification and retrieval of histology images.
JC Caicedo, E Izquierdo
Trans. Mass Data Anal. Images Signals 2 (1), 68-82, 2010
332010
CytoGAN: generative modeling of cell images
P Goldsborough, N Pawlowski, JC Caicedo, S Singh, AE Carpenter
BioRxiv, 227645, 2017
322017
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