Seuraa
John A Lees
John A Lees
Vahvistettu sähköpostiosoite verkkotunnuksessa ebi.ac.uk - Kotisivu
Nimike
Viittaukset
Viittaukset
Vuosi
Potential impact of the COVID-19 pandemic on HIV, tuberculosis, and malaria in low-income and middle-income countries: a modelling study
AB Hogan, BL Jewell, E Sherrard-Smith, JF Vesga, OJ Watson, ...
The Lancet global health 8 (9), e1132-e1141, 2020
936*2020
Reduction in mobility and COVID-19 transmission
P Nouvellet, S Bhatia, A Cori, KEC Ainslie, M Baguelin, S Bhatt, ...
Nature communications 12 (1), 1-9, 2021
6372021
Producing polished prokaryotic pangenomes with the Panaroo pipeline
G Tonkin-Hill, N MacAlasdair, C Ruis, A Weimann, G Horesh, JA Lees, ...
Genome Biology 21 (180), 2020
6332020
Fast and flexible bacterial genomic epidemiology with PopPUNK
J Lees, S Harris, G Tonkin-Hill, R Gladstone, S Lo, J Weiser, J Corander, ...
Genome Research 29 (2), 304-316, 2019
3252019
pyseer: a comprehensive tool for microbial pangenome-wide association studies
JA Lees, M Galardini, SD Bentley, JN Weiser, J Corander
Bioinformatics 34 (24), 4310--4312, 2018
2362018
Fast hierarchical Bayesian analysis of population structure
G Tonkin-Hill, JA Lees, SD Bentley, SDW Frost, J Corander
Nucleic Acids Research 47 (11), 5539–5549, 2019
2342019
RhierBAPS: an R implementation of the population clustering algorithm hierBAPS
G Tonkin-Hill, JA Lees, SD Bentley, SDW Frost, J Corander
Wellcome open research 3 (93), 2018
2332018
Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes
J Lees, M Vehkala, N Välimäki, S Harris, C Chewapreecha, N Croucher, ...
Nature Communications 7, 12797, 2016
2242016
Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole …
SW Lo, RA Gladstone, AJ van Tonder, JA Lees, M du Plessis, R Benisty, ...
The Lancet Infectious Diseases 19 (7), 759-769, 2019
2212019
The potential public health consequences of COVID-19 on malaria in Africa
E Sherrard-Smith, AB Hogan, A Hamlet, OJ Watson, C Whittaker, ...
Nature medicine 26 (9), 1411-1416, 2020
1902020
Atlas of group A streptococcal vaccine candidates compiled using large-scale comparative genomics
MR Davies, L McIntyre, A Mutreja, JA Lacey, JA Lees, RJ Towers, ...
Nature genetics 51, 1035–1043, 2019
1872019
State-level tracking of COVID-19 in the United States
HJT Unwin, S Mishra, VC Bradley, A Gandy, TA Mellan, H Coupland, ...
Nature communications 11 (1), 6189, 2020
1862020
International Genomic Definition of Pneumococcal Lineages, to Contextualise Disease, Antibiotic Resistance and Vaccine Impact
RA Gladstone, SW Lo, JA Lees, NJ Croucher, AJ van Tonder, J Corander, ...
EBioMedicine 43, 338-346, 2019
1802019
Non-pharmaceutical interventions, vaccination, and the SARS-CoV-2 delta variant in England: a mathematical modelling study
R Sonabend, LK Whittles, N Imai, PN Perez-Guzman, ES Knock, ...
The Lancet 398 (10313), 1825-1835, 2021
1692021
Report 21: Estimating COVID-19 cases and reproduction number in Brazil
TA Mellan, HH Hoeltgebaum, S Mishra, C Whittaker, RP Schnekenberg, ...
163*2020
Within-country age-based prioritisation, global allocation, and public health impact of a vaccine against SARS-CoV-2: A mathematical modelling analysis
AB Hogan, P Winskill, OJ Watson, PGT Walker, C Whittaker, M Baguelin, ...
Vaccine 39 (22), 2995-3006, 2021
161*2021
Key epidemiological drivers and impact of interventions in the 2020 SARS-CoV-2 epidemic in England
ES Knock, LK Whittles, JA Lees, PN Perez-Guzman, R Verity, RG FitzJohn, ...
Science Translational Medicine 13 (602), eabg4262, 2021
136*2021
Genome-wide identification of lineage and locus specific variation associated with pneumococcal carriage duration
JA Lees, NJ Croucher, D Goldblatt, F Nosten, J Parkhill, C Turner, ...
eLife 6, e26255, 2017
1132017
Benzalkonium tolerance genes and outcome in Listeria monocytogenes meningitis
PHC Kremer, JA Lees, MM Koopmans, B Ferwerda, AWM Arends, ...
Clinical Microbiology and Infection 23 (4), 265. e1-265. e7, 2017
1112017
Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era
AK Pöntinen, J Top, S Arredondo-Alonso, G Tonkin-Hill, AR Freitas, ...
Nature communications 12 (1), 1523, 2021
1092021
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Artikkelit 1–20