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Ammar S. Naqvi
Ammar S. Naqvi
Children's Hospital of Philadelphia
Verified email at email.chop.edu
Title
Cited by
Cited by
Year
Characterization of the oral fungal microbiome (mycobiome) in healthy individuals
MA Ghannoum, RJ Jurevic, PK Mukherjee, F Cui, M Sikaroodi, A Naqvi, ...
PLoS pathogens 6 (1), e1000713, 2010
12012010
Colonic microbiome is altered in alcoholism
EA Mutlu, PM Gillevet, H Rangwala, M Sikaroodi, A Naqvi, PA Engen, ...
American Journal of Physiology-Gastrointestinal and Liver Physiology 302 (9 …, 2012
7672012
Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
E Berezikov, N Robine, A Samsonova, JO Westholm, A Naqvi, JH Hung, ...
Genome research 21 (2), 203-215, 2011
2712011
The exoribonuclease Nibbler controls 3′ end processing of microRNAs in Drosophila
N Liu, M Abe, LR Sabin, GJ Hendriks, AS Naqvi, Z Yu, S Cherry, ...
Current Biology 21 (22), 1888-1893, 2011
1652011
The Msi family of RNA-binding proteins function redundantly as intestinal oncoproteins
N Li, M Yousefi, A Nakauka-Ddamba, F Li, L Vandivier, K Parada, ...
Cell reports 13 (11), 2440-2455, 2015
1052015
Age-driven modulation of tRNA-derived fragments in Drosophila and their potential targets
S Karaiskos, AS Naqvi, KE Swanson, A Grigoriev
Biology direct 10, 1-13, 2015
992015
Impact of age-associated increase in 2′-O-methylation of miRNAs on aging and neurodegeneration in Drosophila
M Abe, A Naqvi, GJ Hendriks, V Feltzin, Y Zhu, A Grigoriev, NM Bonini
Genes & development 28 (1), 44-57, 2014
752014
Retention of CD19 intron 2 contributes to CART-19 resistance in leukemias with subclonal frameshift mutations in CD19
M Asnani, KE Hayer, AS Naqvi, S Zheng, SY Yang, D Oldridge, F Ibrahim, ...
Leukemia 34 (4), 1202-1207, 2020
732020
Network‐based modeling of the human gut microbiome
A Naqvi, H Rangwala, A Keshavarzian, P Gillevet
Chemistry & biodiversity 7 (5), 1040-1050, 2010
612010
Aberrant splicing in B-cell acute lymphoblastic leukemia
KL Black, AS Naqvi, M Asnani, KE Hayer, SY Yang, E Gillespie, ...
Nucleic acids research 46 (21), 11357-11369, 2018
522018
Heterogeneity of surface CD19 and CD22 expression in B lymphoblastic leukemia
J Rosenthal, AS Naqvi, M Luo, G Wertheim, M Paessler, ...
American Journal of Hematology 93 (11), E352-E355, 2018
482018
Modulation of CD22 protein expression in childhood leukemia by pervasive splicing aberrations: implications for CD22-directed immunotherapies
S Zheng, E Gillespie, AS Naqvi, KE Hayer, Z Ang, M Torres-Diz, ...
Blood cancer discovery 3 (2), 103-115, 2022
292022
Targeting CD123 in blastic plasmacytoid dendritic cell neoplasm using allogeneic anti-CD123 CAR T cells
T Cai, A Gouble, KL Black, A Skwarska, AS Naqvi, D Taylor, M Zhao, ...
Nature communications 13 (1), 2228, 2022
182022
A transcriptome-based classifier to determine molecular subtypes in medulloblastoma
KS Rathi, S Arif, M Koptyra, AS Naqvi, DM Taylor, PB Storm, AC Resnick, ...
PLoS Computational Biology 16 (10), e1008263, 2020
102020
Aberrant splicing in B-cell acute lymphoblastic leukemia
KL Black, AS Naqvi, M Asnani, KE Hayer, SY Yang, E Gillespie, ...
Nucleic Acids Research 47 (2), 1043, 2019
92019
Analysis of multitag pyrosequence data from human cervical lavage samples
A Naqvi, H Rangwala, G Spear, P Gillevet
Chemistry & Biodiversity 7 (5), 1076-1085, 2010
82010
annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions
KS Gaonkar, F Marini, KS Rathi, P Jain, Y Zhu, NA Chimicles, MA Brown, ...
BMC bioinformatics 21, 1-21, 2020
52020
Visualization of nucleotide substitutions in the (micro) transcriptome
A Naqvi, T Cui, A Grigoriev
BMC genomics 15, 1-8, 2014
52014
FBXW7β isoform drives transcriptional activation of the proinflammatory TNF cluster in human pro-B cells
SY Yang, KE Hayer, H Fazelinia, LA Spruce, M Asnani, KL Black, ...
Blood Advances 7 (7), 1077-1091, 2023
32023
Pipeline for discovering neoepitopes generated by alternative splicing in B-ALL
S Zheng, AS Naqvi, E Bolton-Gillespie, M Asnani, K Hayer, Y Barash, ...
Blood 134, 1342, 2019
32019
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Articles 1–20