Seuraa
Mahfuza Sharmin
Mahfuza Sharmin
Postdoctoral Research Fellow, Stanford University. PhD in Computer Science, University of Maryland
Vahvistettu sähköpostiosoite verkkotunnuksessa stanford.edu
Nimike
Viittaukset
Viittaukset
Vuosi
Technical note on transcription factor motif discovery from importance scores (TF-MoDISco) version 0.5. 6.5
A Shrikumar, K Tian, Ž Avsec, A Shcherbina, A Banerjee, M Sharmin, ...
arXiv preprint arXiv:1811.00416, 2018
952018
The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation
DS Kim, VI Risca, DL Reynolds, J Chappell, AJ Rubin, N Jung, ...
Nature genetics 53 (11), 1564-1576, 2021
492021
Beyond synthetic lethality: charting the landscape of pairwise gene expression states associated with survival in cancer
A Magen, AD Sahu, JS Lee, M Sharmin, A Lugo, JS Gutkind, AA Schäffer, ...
Cell reports 28 (4), 938-948. e6, 2019
362019
Tf-Modisco v0. 4.4. 2-Alpha
A Shrikumar, K Tian, A Shcherbina, Ž Avsec, A Banerjee, M Sharmin, ...
arXiv preprint arXiv:1811.00416, 2018
232018
Pancake flipping with two spatulas
M Sharmin, R Yeasmin, M Hasan, A Rahman, MS Rahman
Electronic Notes in Discrete Mathematics 36, 231-238, 2010
212010
Ensuring beta-availability in p2p social networks
N Shahriar, SR Chowdhury, M Sharmin, R Ahmed, R Boutaba, B Mathieu
2013 IEEE 33rd International Conference on Distributed Computing Systems …, 2013
192013
Diurnal availability for peer-to-peer systems
N Shahriar, M Sharmin, R Ahmed, MM Rahman, R Boutaba, B Mathieu
2012 IEEE Consumer Communications and Networking Conference (CCNC), 619-623, 2012
182012
Tf-modisco v0. 4.2. 2-alpha: Technical note
A Shrikumar, K Tian, A Shcherbina, Ž Avsec, A Banerjee, M Sharmin, ...
Preprint at arXiv https://arxiv. org/abs/1811.00416 v2, 2018
112018
Heterogeneity of transcription factor binding specificity models within and across cell lines
M Sharmin, HC Bravo, S Hannenhalli
Genome research 26 (8), 1110-1123, 2016
102016
Technical note on transcription factor motif discovery from importance scores (TF-MoDISco)
A Shrikumar, K Tian, Z Avsec, A Shcherbina, A Banerjee, M Sharmin, ...
bioRxiv, 2018
72018
Prediction and subtyping of hypertension from pan-tissue transcriptomic and genetic analyses
M Basu, M Sharmin, A Das, NU Nair, K Wang, JS Lee, YPC Chang, ...
Genetics 207 (3), 1121-1134, 2017
72017
Pancake flipping and sorting permutations
M Hasan, A Rahman, MK Rahman, MS Rahman, M Sharmin, R Yeasmin
Journal of Discrete Algorithms 33, 139-149, 2015
52015
Distinct genomic and epigenomic features demarcate hypomethylated blocks in colon cancer
M Sharmin, HC Bravo, S Hannenhalli
BMC cancer 16, 1-10, 2016
42016
Availability in P2P based online social networks
N Shahriar, SR Chowdhury, R Ahmed, M Sharmin, R Boutaba, B Mathieu
2017 4th International Conference on Networking, Systems and Security (NSysS …, 2017
32017
A Short Review on the History of Mobile Phones
R Hossain, MR Hasan, M Sharmin
3
Chromatin accessibility dynamics of neurogenic niche cells reveal defects in neural stem cell adhesion and migration during aging
RW Yeo, OY Zhou, BL Zhong, ED Sun, P Navarro Negredo, S Nair, ...
Nature Aging 3 (7), 866-893, 2023
22023
SS-ADC: Scatter search with adaptive diversity control
S Rubya, S Monir, M Sharmin, MS Alam, MS Rahman
2012 7th International Conference on Electrical and Computer Engineering …, 2012
12012
Placement of unique restriction sites in synthetic genomes using multi-objective optimization
M Sharmin, MS Rahman
2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-4, 2012
12012
Cycle Thresholds in Machine Learning for Forecasting Infection Counts
M Sharmin, M Manivannan, D Woo, I Mujawar, M Gandhi
US Patent App. 18/225,065, 2024
2024
BEENE: deep learning-based nonlinear embedding improves batch effect estimation
MA Rahman, AA Tutul, M Sharmin, MS Bayzid
Bioinformatics 39 (8), btad479, 2023
2023
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Artikkelit 1–20