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| Forces shaping the fastest evolving regions in the human genome KS Pollard, SR Salama, B King, AD Kern, T Dreszer, S Katzman, A Siepel, ... PLoS genetics 2 (10), e168, 2006 | 574 | 2006 |
| An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons FMJ Jacobs, D Greenberg, N Nguyen, M Haeussler, AD Ewing, ... Nature 516 (7530), 242, 2014 | 490 | 2014 |
| FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing JG Underwood, AV Uzilov, S Katzman, CS Onodera, JE Mainzer, ... Nature methods 7 (12), 995, 2010 | 389 | 2010 |
| Human genome ultraconserved elements are ultraselected S Katzman, AD Kern, G Bejerano, G Fewell, L Fulton, RK Wilson, ... Science 317 (5840), 915-915, 2007 | 294 | 2007 |
| Human tRNA genes function as chromatin insulators JR Raab, J Chiu, J Zhu, S Katzman, S Kurukuti, PA Wade, D Haussler, ... The EMBO journal 31 (2), 330-350, 2012 | 175 | 2012 |
| RNA-binding protein IGF2BP3 targeting of oncogenic transcripts promotes hematopoietic progenitor proliferation JK Palanichamy, TM Tran, JM Howard, JR Contreras, TR Fernando, ... The Journal of clinical investigation 126 (4), 1495-1511, 2016 | 156 | 2016 |
| Competition between pre-mRNAs for the splicing machinery drives global regulation of splicing EM Munding, L Shiue, S Katzman, JP Donohue, M Ares Molecular cell 51 (3), 338-348, 2013 | 128 | 2013 |
| Double minute chromosomes in glioblastoma multiforme are revealed by precise reconstruction of oncogenic amplicons JZ Sanborn, SR Salama, M Grifford, CW Brennan, T Mikkelsen, ... Cancer research 73 (19), 6036-6045, 2013 | 121 | 2013 |
| Frac-seq reveals isoform-specific recruitment to polyribosomes T Sterne-Weiler, RT Martinez-Nunez, JM Howard, I Cvitovik, S Katzman, ... Genome research 23 (10), 1615-1623, 2013 | 115 | 2013 |
| Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression RG De Bruin, L Shiue, J Prins, HC De Boer, A Singh, WS Fagg, ... Nature communications 7, 10846, 2016 | 102 | 2016 |
| Mutual regulation between Satb2 and Fezf2 promotes subcerebral projection neuron identity in the developing cerebral cortex WL McKenna, CF Ortiz-Londono, TK Mathew, K Hoang, S Katzman, ... Proceedings of the National Academy of Sciences 112 (37), 11702-11707, 2015 | 96 | 2015 |
| Foxg1 coordinates the switch from nonradially to radially migrating glutamatergic subtypes in the neocortex through spatiotemporal repression T Kumamoto, K Toma, WL McKenna, T Kasukawa, S Katzman, B Chen, ... Cell reports 3 (3), 931-945, 2013 | 92 | 2013 |
| CRISPR/Cas-based screening of long non-coding RNAs (lncRNAs) in macrophages with an NF-κB reporter S Covarrubias, EK Robinson, B Shapleigh, A Vollmers, S Katzman, ... Journal of Biological Chemistry 292 (51), 20911-20920, 2017 | 85 | 2017 |
| IGF2BP3 modulates the interaction of invasion-associated transcripts with RISC H Ennajdaoui, JM Howard, T Sterne-Weiler, F Jahanbani, DJ Coyne, ... Cell reports 15 (9), 1876-1883, 2016 | 84 | 2016 |
| TBR1 regulates autism risk genes in the developing neocortex JH Notwell, WE Heavner, SF Darbandi, S Katzman, WL McKenna, ... Genome research 26 (8), 1013-1022, 2016 | 81 | 2016 |
| Ongoing GC-biased evolution is widespread in the human genome and enriched near recombination hot spots S Katzman, JA Capra, D Haussler, KS Pollard Genome biology and evolution 3, 614-626, 2011 | 71 | 2011 |
| Structurally conserved primate lncRNAs are transiently expressed during human cortical differentiation and influence cell type specific genes AR Field, FMJ Jacobs, IT Fiddes, APR Phillips, AM Reyes-Ortiz, ... bioRxiv, 232553, 2017 | 64 | 2017 |
| Nuclear factor one B regulates neural stem cell differentiation and axonal projection of corticofugal neurons J Betancourt, S Katzman, B Chen Journal of Comparative Neurology 522 (1), 6-35, 2014 | 61 | 2014 |
| Evidence for convergent evolution of SINE-directed Staufen-mediated mRNA decay BA Lucas, E Lavi, L Shiue, H Cho, S Katzman, K Miyoshi, MC Siomi, ... Proceedings of the National Academy of Sciences, 201715531, 2018 | 54 | 2018 |
