Arang Rhie
Arang Rhie
Vahvistettu sähköpostiosoite verkkotunnuksessa
Nanopore sequencing and assembly of a human genome with ultra-long reads
M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ...
Nature biotechnology 36 (4), 338-345, 2018
De novo assembly and phasing of a Korean human genome
JS Seo, A Rhie, J Kim, S Lee, MH Sohn, CU Kim, A Hastie, H Cao, JY Yun, ...
Nature 538 (7624), 243-247, 2016
Telomere-to-telomere assembly of a complete human X chromosome
KH Miga, S Koren, A Rhie, MR Vollger, A Gershman, A Bzikadze, ...
Nature 585 (7823), 79-84, 2020
De novo assembly of haplotype-resolved genomes with trio binning
S Koren, A Rhie, BP Walenz, AT Dilthey, DM Bickhart, SB Kingan, ...
Nature biotechnology 36 (12), 1174-1182, 2018
FX: an RNA-Seq analysis tool on the cloud
D Hong, A Rhie, SS Park, J Lee, YS Ju, S Kim, SB Yu, T Bleazard, ...
Bioinformatics 28 (5), 721-723, 2012
De novo assembly of the cattle reference genome with single-molecule sequencing
BD Rosen, DM Bickhart, RD Schnabel, S Koren, CG Elsik, E Tseng, ...
Gigascience 9 (3), giaa021, 2020
Integrating Hi-C links with assembly graphs for chromosome-scale assembly
SK Jay Ghurye, Arang Rhie, Brian P. Walenz, Anthony Schmitt, Siddarth ...
PLOS Computational Biology, 2019
HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads
S Nurk, BP Walenz, A Rhie, MR Vollger, GA Logsdon, R Grothe, KH Miga, ...
Genome research 30 (9), 1291-1305, 2020
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies
A Rhie, B P. Walenz, S Koren, A M. Phillippy
Genome Biology 21 (245), 2020
Improved reference genome of the arboviral vector Aedes albopictus
U Palatini, RA Masri, LV Cosme, S Koren, F Thibaud-Nissen, JK Biedler, ...
Genome biology 21 (1), 1-29, 2020
Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
WY Low, R Tearle, R Liu, S Koren, A Rhie, DM Bickhart, BD Rosen, ...
Nature communications 11 (1), 1-14, 2020
HLA* LA—HLA typing from linearly projected graph alignments
AT Dilthey, AJ Mentzer, R Carapito, C Cutland, N Cereb, SA Madhi, ...
Bioinformatics 35 (21), 4394-4396, 2019
Extended haplotype phasing of de novo genome assemblies with FALCON-Phase
ZN Kronenberg, A Rhie, S Koren, GT Concepcion, P Peluso, KM Munson, ...
biorxiv, 327064, 2019
Weighted minimizer sampling improves long read mapping
C Jain, A Rhie, H Zhang, C Chu, BP Walenz, S Koren, AM Phillippy
Bioinformatics 36 (Supplement_1), i111-i118, 2020
The structure, function, and evolution of a complete human chromosome 8
GA Logsdon, MR Vollger, PH Hsieh, Y Mao, MA Liskovykh, S Koren, ...
bioRxiv, 2020
Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle
ES Rice, S Koren, A Rhie, MP Heaton, TS Kalbfleisch, T Hardy, ...
Gigascience 9 (4), giaa029, 2020
New insights into mammalian sex chromosome structure and evolution using high-quality sequences from bovine X and Y chromosomes
R Liu, WY Low, R Tearle, S Koren, J Ghurye, A Rhie, AM Phillippy, ...
BMC genomics 20 (1), 1-11, 2019
Reference genome and demographic history of the most endangered marine mammal, the vaquita
PA Morin, FI Archer, CD Avila, JR Balacco, YV Bukhman, W Chow, ...
Molecular Ecology Resources 21 (4), 1008-1020, 2021
Genomic copy number variations characterize the prognosis of both P16-positive and P16-negative oropharyngeal squamous cell carcinoma after curative resection
A Rhie, WS Park, MK Choi, JH Kim, J Ryu, CH Ryu, JI Kim, YS Jung
Medicine 94 (50), 2015
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Artikkelit 1–20