| MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis D Vallenet, A Calteau, M Dubois, P Amours, A Bazin, M Beuvin, L Burlot, ... Nucleic acids research 48 (D1), D579-D589, 2020 | 248 | 2020 |
| PPanGGOLiN: depicting microbial diversity via a partitioned pangenome graph G Gautreau, A Bazin, M Gachet, R Planel, L Burlot, M Dubois, A Perrin, ... PLoS computational biology 16 (3), e1007732, 2020 | 143 | 2020 |
| Stress and worry in the 2020 coronavirus pandemic: Relationships to trust and compliance with preventive measures across 48 countries in the COVIDiSTRESS global survey A Lieberoth, SY Lin, S Stöckli, H Han, M Kowal, R Gelpi, S Chrona, ... Royal Society Open Science 8 (2), 200589, 2021 | 137 | 2021 |
| COVIDiSTRESS Global Survey dataset on psychological and behavioural consequences of the COVID-19 outbreak Y Yamada, DB Ćepulić, T Coll-Martín, S Debove, G Gautreau, H Han, ... Scientific data 8 (1), 3, 2021 | 129 | 2021 |
| MicroScope—an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data C Médigue, A Calteau, S Cruveiller, M Gachet, G Gautreau, A Josso, ... Briefings in bioinformatics 20 (4), 1071-1084, 2019 | 60 | 2019 |
| SPADEVizR: an R package for visualization, analysis and integration of SPADE results G Gautreau, D Pejoski, R Le Grand, A Cosma, AS Beignon, N Tchitchek Bioinformatics 33 (5), 779-781, 2017 | 40 | 2017 |
| panRGP: a pangenome-based method to predict genomic islands and explore their diversity A Bazin, G Gautreau, C Médigue, D Vallenet, A Calteau Bioinformatics 36 (Supplement_2), i651-i658, 2020 | 35 | 2020 |
| A computational approach for phenotypic comparisons of cell populations in high-dimensional cytometry data L Platon, D Pejoski, G Gautreau, B Targat, R Le Grand, AS Beignon, ... Methods 132, 66-75, 2018 | 20 | 2018 |
| COVIDiSTRESS Global Survey dataset on psychological and behavioural consequences of the COVID-19 outbreak. Scientific Data, 8, 3 Y Yamada, DB Ćepulić, T Coll-Martín, S Debove, G Gautreau, H Han, ... | 7 | 2021 |
| COVIDiSTRESS Global Survey dataset on psychological and behavioural consequences of the COVID-19 outbreak. Sci. Data, 8, 3 Y Yamada, DB Ćepulić, T Coll-Martín, S Debove, G Gautreau, H Han, ... | 6 | 2021 |
| panRGP: a pangenome-based method to predict genomic islands and explore their diversity. Bioinformatics 36: i651–i658 A Bazin, G Gautreau, C Médigue, D Vallenet, A Calteau | 5 | 2020 |
| COVIDiSTRESS Global Survey dataset on psychological and behavioural consequences of the COVID-19 outbreak. Sci Data. 2021; 8 (1): 3 Y Yamada, DB Ćepulić, T Coll-Martín, S Debove, G Gautreau, H Han Epub 2021/01/06. doi: 10.1038/s41597-020-00784-9. PubMed PMID: 33398078 7 (2 …, 0 | 4 | |
| Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph G Gautreau, A Bazin, M Gachet, R Planel, L Burlot, M Dubois, A Perrin, ... PLOS Computational Biology 17 (12), e1009687, 2021 | 2 | 2021 |
| Extensive benchmark of machine learning methods for quantitative microbiome data S Fromentin, FP Oñate, N Maziers, SB Ibraim, G Gautreau, O Gitton-Quent, ... JOBIM, 2021 | 1 | 2021 |
| Conceptualisation et exploitation d’un graphe de pangénome partitionné comme représentation compacte de la diversité du répertoire génique des espèces procaryotes G Gautreau Université Paris-Saclay, 2020 | 1 | 2020 |
| MICROSCOPE: an integrated platform for the Exploration and Curation of Microbrial Genomes D Vallenet, A Calteau, S Cruveiller, M Gachet, G Gautreau, A Josso, ... Biologie, Informatiqueet Mathématiques, 119, 2017 | 1 | 2017 |
| CroCoDeEL: accurate detection of cross-sample contamination in metagenomic data L Goulet, FP Oñate, P Barbet, E Prifti, E Belda, E Le Chatelier, G Gautreau 10th International Human Microbiome Consortium Congress, 2024 | | 2024 |
| Integrating Complex Pangenome Graphs J Arnoux, A Bonifati, A Calteau, S Dumbrava, G Gautreau 2024 IEEE 40th International Conference on Data Engineering Workshops (ICDEW …, 2024 | | 2024 |
| Ruminococcus gnavus in Spondyloarthritis, story of a commensal killer M Jacoutot, M Beaufrère, E Frison, V Robert, Said-Nahal R, G Gautreau, ... One-DAY GREMI meeting, 2023 | | 2023 |
| PPanGGOLiN V2: technical enhancement and new features to analyze thousands of prokaryotic genomes J Mainguy, J Arnoux, G Gautreau, A Bazin, D Vallenet, A Calteau The local pangenome, 2023 | | 2023 |
Alexandra CALTEAUCEA/DRF/Genoscope/LABGeM & CNRS UMR8030Vahvistettu sähköpostiosoite verkkotunnuksessa genoscope.cns.fr
