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Takumi Murakami
Takumi Murakami
Verified email at m.titech.ac.jp
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Microbial interaction between the succinate‐utilizing bacterium Phascolarctobacterium faecium and the gut commensal Bacteroides thetaiotaomicron
N Ikeyama, T Murakami, A Toyoda, H Mori, T Iino, M Ohkuma, ...
Microbiologyopen 9 (10), e1111, 2020
642020
Genome analyses of uncultured TG2/ZB3 bacteria in ‘Margulisbacteria’specifically attached to ectosymbiotic spirochetes of protists in the termite gut
YD Utami, H Kuwahara, K Igai, T Murakami, K Sugaya, T Morikawa, ...
The ISME Journal 13 (2), 455-467, 2019
442019
Census of bacterial microbiota associated with the glacier ice worm Mesenchytraeus solifugus
T Murakami, T Segawa, D Bodington, R Dial, N Takeuchi, S Kohshima, ...
FEMS microbiology ecology 91 (3), fiv003, 2015
402015
Phylogenetic diversity and single-cell genome analysis of “Melainabacteria”, a non-photosynthetic cyanobacterial group, in the termite gut
YD Utami, H Kuwahara, T Murakami, T Morikawa, K Sugaya, K Kihara, ...
Microbes and environments 33 (1), 50-57, 2018
392018
Gut bacterial species distinctively impact host purine metabolites during aging in Drosophila
T Yamauchi, A Oi, H Kosakamoto, Y Akuzawa-Tokita, T Murakami, H Mori, ...
Iscience 23 (9), 2020
282020
Dialister hominis sp. nov., isolated from human faeces
M Sakamoto, N Ikeyama, A Toyoda, T Murakami, H Mori, T Iino, ...
International journal of systematic and evolutionary microbiology 70 (1 …, 2020
232020
Metagenomic analyses highlight the symbiotic association between the glacier stonefly Andiperla willinki and its bacterial gut community
T Murakami, T Segawa, N Takeuchi, G Barcaza Sepúlveda, P Labarca, ...
Environmental microbiology 20 (11), 4170-4183, 2018
232018
Local necrotic cells trigger systemic immune activation via gut microbiome dysbiosis in Drosophila
H Kosakamoto, T Yamauchi, Y Akuzawa-Tokita, K Nishimura, T Soga, ...
Cell Reports 32 (3), 2020
192020
Ectosymbiotic bacterial microbiota densely colonize the surface of thelastomatid nematodes in the gut of the wood-feeding cockroach Panesthia angustipennis
T Murakami, S Onouchi, K Igai, M Ohkuma, Y Hongoh
FEMS microbiology ecology 95 (2), fiy238, 2019
122019
Bacterial microbiota associated with the glacier ice worm is dominated by both worm-specific and glacier-derived facultative lineages
T Murakami, T Segawa, R Dial, N Takeuchi, S Kohshima, Y Hongoh
Microbes and environments 32 (1), 32-39, 2017
122017
Dietary-protein sources modulate host susceptibility to Clostridioides difficile infection through the gut microbiota
K Yakabe, S Higashi, M Akiyama, H Mori, T Murakami, A Toyoda, ...
Cell Reports 40 (11), 2022
112022
Metagenomics reveals global-scale contrasts in nitrogen cycling and cyanobacterial light-harvesting mechanisms in glacier cryoconite
T Murakami, N Takeuchi, H Mori, Y Hirose, A Edwards, T Irvine-Fynn, Z Li, ...
Microbiome 10 (1), 50, 2022
102022
Parallel reductive genome evolution in Desulfovibrio ectosymbionts independently acquired by Trichonympha protists in the termite gut
M Takeuchi, H Kuwahara, T Murakami, K Takahashi, R Kajitani, A Toyoda, ...
The ISME Journal 14 (9), 2288-2301, 2020
102020
Comparative genomics of Parolsenella catena and Libanicoccus massiliensis: Reclassification of Libanicoccus massiliensis as Parolsenella massiliensis comb …
M Sakamoto, N Ikeyama, T Murakami, H Mori, M Yuki, M Ohkuma
International Journal of Systematic and Evolutionary Microbiology 69 (4 …, 2019
82019
Recognition of commensal bacterial peptidoglycans defines Drosophila gut homeostasis and lifespan
T Onuma, T Yamauchi, H Kosakamoto, H Kadoguchi, T Kuraishi, ...
PLoS Genetics 19 (4), e1010709, 2023
72023
Amedibacterium intestinale gen. nov., sp. nov., isolated from human faeces, and reclassification of Eubacterium dolichum Moore et al. 1976 (Approved Lists 1980) as …
N Ikeyama, A Toyoda, S Morohoshi, T Kunihiro, T Murakami, H Mori, ...
International Journal of Systematic and Evolutionary Microbiology 70 (6 …, 2020
72020
Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces
M Sakamoto, N Ikeyama, M Yuki, T Murakami, H Mori, T Iino, M Ohkuma
International Journal of Systematic and Evolutionary Microbiology 71 (12 …, 2021
62021
Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces
M Sakamoto, N Ikeyama, A Toyoda, T Murakami, H Mori, S Morohoshi, ...
Microbiology and Immunology 65 (6), 245-256, 2021
52021
Draft Genome Sequence of Clostridium tagluense Strain A121T, Isolated from a Permafrost Core in the Canadian High Arctic
T Murakami, H Mori, VA Shcherbakova, Y Yoshimura, T Segawa
Microbiology Resource Announcements 8 (5), 10.1128/mra. 01630-18, 2019
42019
Assessment of metagenomic workflows using a newly constructed human gut microbiome mock community
H Mori, T Kato, H Ozawa, M Sakamoto, T Murakami, TD Taylor, A Toyoda, ...
DNA Research 30 (3), dsad010, 2023
32023
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