Richard Scheltema
Title
Cited by
Cited by
Year
Andromeda: a peptide search engine integrated into the MaxQuant environment
J Cox, N Neuhauser, A Michalski, RA Scheltema, JV Olsen, M Mann
Journal of proteome research 10 (4), 1794-1805, 2011
42372011
The Q Exactive HF, a Benchtop mass spectrometer with a pre-filter, high-performance quadrupole and an ultra-high-field Orbitrap analyzer
RA Scheltema, JP Hauschild, O Lange, D Hornburg, E Denisov, E Damoc, ...
Molecular & Cellular Proteomics 13 (12), 3698-3708, 2014
3112014
PeakML/mzMatch: a file format, Java library, R library, and tool-chain for mass spectrometry data analysis
RA Scheltema, A Jankevics, RC Jansen, MA Swertz, R Breitling
Analytical chemistry 83 (7), 2786-2793, 2011
2972011
System-wide molecular evidence for phenotypic buffering in Arabidopsis
J Fu, JJB Keurentjes, H Bouwmeester, T America, FWA Verstappen, ...
Nature genetics 41 (2), 166-167, 2009
2692009
Direct proteomic quantification of the secretome of activated immune cells
F Meissner, RA Scheltema, HJ Mollenkopf, M Mann
Science 340 (6131), 475-478, 2013
1772013
Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification
F Liu, P Lössl, R Scheltema, R Viner, AJR Heck
Nature communications 8 (1), 1-8, 2017
1762017
Time‐and compartment‐resolved proteome profiling of the extracellular niche in lung injury and repair
HB Schiller, IE Fernandez, G Burgstaller, C Schaab, RA Scheltema, ...
Molecular systems biology 11 (7), 819, 2015
1502015
Structural model of a CRISPR RNA-silencing complex reveals the RNA-target cleavage activity in Cmr4
C Benda, J Ebert, RA Scheltema, HB Schiller, M Baumgärtner, F Bonneau, ...
Molecular cell 56 (1), 43-54, 2014
1262014
Metabolomic profiling using Orbitrap Fourier transform mass spectrometry with hydrophilic interaction chromatography: a method with wide applicability to analysis of biomolecules
A Kamleh, MP Barrett, D Wildridge, RJS Burchmore, RA Scheltema, ...
Rapid Communications in Mass Spectrometry: An International Journal Devoted …, 2008
1162008
Metabolomics to unveil and understand phenotypic diversity between pathogen populations
R t'Kindt, RA Scheltema, A Jankevics, K Brunker, S Rijal, JC Dujardin, ...
PLoS neglected tropical diseases 4 (11), e904, 2010
1032010
Probabilistic assignment of formulas to mass peaks in metabolomics experiments
S Rogers, RA Scheltema, M Girolami, R Breitling
Bioinformatics 25 (4), 512-518, 2009
1032009
Spacer capture and integration by a type IF Cas1–Cas2-3 CRISPR adaptation complex
RD Fagerlund, ME Wilkinson, O Klykov, A Barendregt, FG Pearce, ...
Proceedings of the National Academy of Sciences 114 (26), E5122-E5128, 2017
902017
Efficient and robust proteome-wide approaches for cross-linking mass spectrometry
O Klykov, B Steigenberger, S Pektaş, D Fasci, AJR Heck, RA Scheltema
Nature protocols 13 (12), 2964-2990, 2018
822018
Metabolomic Characterization of the Salt Stress Response in Streptomyces coelicolor
S Kol, ME Merlo, RA Scheltema, M de Vries, RJ Vonk, NA Kikkert, ...
Applied and environmental microbiology 76 (8), 2574-2581, 2010
742010
Implementation of ultraviolet photodissociation on a benchtop Q exactive mass spectrometer and its application to phosphoproteomics
KL Fort, A Dyachenko, CM Potel, E Corradini, F Marino, A Barendregt, ...
Analytical chemistry 88 (4), 2303-2310, 2016
682016
Increasing the mass accuracy of high‐resolution LC‐MS data using background ions–a case study on the LTQ‐Orbitrap
RA Scheltema, A Kamleh, D Wildridge, C Ebikeme, DG Watson, ...
Proteomics 8 (22), 4647-4656, 2008
632008
Simple data-reduction method for high-resolution LC–MS data in metabolomics
RA Scheltema, S Decuypere, JC Dujardin, DG Watson, RC Jansen, ...
Bioanalysis 1 (9), 1551-1557, 2009
622009
Histone interaction landscapes visualized by crosslinking mass spectrometry in intact cell nuclei
D Fasci, H van Ingen, RA Scheltema, AJR Heck
Molecular & Cellular Proteomics 17 (10), 2018
612018
PhoX: an IMAC-enrichable cross-linking reagent
B Steigenberger, RJ Pieters, AJR Heck, RA Scheltema
ACS central science 5 (9), 1514-1522, 2019
602019
A framework for intelligent data acquisition and real-time database searching for shotgun proteomics
J Graumann, RA Scheltema, Y Zhang, J Cox, M Mann
Molecular & Cellular Proteomics 11 (3), 2012
602012
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Articles 1–20