Gurkan Bebek
Gurkan Bebek
Faculty of Medicine, Case Center for Protemics and Bioinformatics, Case Western Reserve University
Vahvistettu sähköpostiosoite verkkotunnuksessa case.edu
Nimike
Viittaukset
Viittaukset
Vuosi
Identification of a central role for complement in osteoarthritis
Q Wang, AL Rozelle, CM Lepus, CR Scanzello, JJ Song, DM Larsen, ...
Nature medicine 17 (12), 1674-1679, 2011
4862011
DADA: degree-aware algorithms for network-based disease gene prioritization
S Erten, G Bebek, RM Ewing, M Koyutürk
BioData mining 4 (1), 1-20, 2011
1402011
PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
G Bebek, J Yang
BMC bioinformatics 8 (1), 1-13, 2007
1402007
FOXA1 represses the molecular phenotype of basal breast cancer cells
GM Bernardo, G Bebek, CL Ginther, ST Sizemore, KL Lozada, JD Miedler, ...
Oncogene 32 (5), 554-563, 2013
1302013
Germline mutations in MSR1, ASCC1, and CTHRC1 in patients with Barrett esophagus and esophageal adenocarcinoma
M Orloff, C Peterson, X He, S Ganapathi, B Heald, Y Yang, G Bebek, ...
JAmA 306 (4), 410-419, 2011
1202011
Proteomic analysis of synovial fluid from the osteoarthritic knee: comparison with transcriptome analyses of joint tissues
SY Ritter, R Subbaiah, G Bebek, J Crish, CR Scanzello, B Krastins, ...
Arthritis & Rheumatism 65 (4), 981-992, 2013
1192013
Quantitative H2S-mediated protein sulfhydration reveals metabolic reprogramming during the integrated stress response
XH Gao, D Krokowski, BJ Guan, I Bederman, M Majumder, M Parisien, ...
elife 4, e10067, 2015
1152015
Vavien: an algorithm for prioritizing candidate disease genes based on topological similarity of proteins in interaction networks
S Erten, G Bebek, M Koyutürk
Journal of computational biology 18 (11), 1561-1574, 2011
862011
Hypoxic induction of vasorin regulates Notch1 turnover to maintain glioma stem-like cells
J Man, X Yu, H Huang, W Zhou, C Xiang, H Huang, L Miele, Z Liu, ...
Cell stem cell 22 (1), 104-118. e6, 2018
792018
The degree distribution of the generalized duplication model
G Bebek, P Berenbrink, C Cooper, T Friedetzky, J Nadeau, SC Sahinalp
Theoretical Computer Science 369 (1-3), 239-249, 2006
742006
Microbiomic differences in tumor and paired-normal tissue in head and neck squamous cell carcinomas
H Wang, P Funchain, G Bebek, J Altemus, H Zhang, F Niazi, C Peterson, ...
Genome medicine 9 (1), 1-10, 2017
612017
Specific kinesin expression profiles associated with taxane resistance in basal-like breast cancer
MH Tan, S De, G Bebek, MS Orloff, R Wesolowski, E Downs-Kelly, ...
Breast cancer research and treatment 131 (3), 849-858, 2012
562012
Network biology methods integrating biological data for translational science
G Bebek, M Koyutürk, ND Price, MR Chance
Briefings in bioinformatics 13 (4), 446-459, 2012
552012
Microbiomic subprofiles and MDR1 promoter methylation in head and neck squamous cell carcinoma
G Bebek, KL Bennett, P Funchain, R Campbell, R Seth, J Scharpf, ...
Human molecular genetics 21 (7), 1557-1565, 2012
522012
Neural transcriptome of constitutional Pten dysfunction in mice and its relevance to human idiopathic autism spectrum disorder
AK Tilot, G Bebek, F Niazi, JB Altemus, T Romigh, TW Frazier, C Eng
Molecular psychiatry 21 (1), 118-125, 2016
432016
Phylogenetic analysis of modularity in protein interaction networks
S Erten, X Li, G Bebek, J Li, M Koyutürk
BMC bioinformatics 10 (1), 1-14, 2009
412009
Chromosome 3 status in uveal melanoma: a comparison of fluorescence in situ hybridization and single-nucleotide polymorphism array
AD Singh, ME Aronow, Y Sun, G Bebek, Y Saunthararajah, ...
Investigative ophthalmology & visual science 53 (7), 3331-3339, 2012
362012
Integrated analysis reveals critical genomic regions in prostate tumor microenvironment associated with clinicopathologic phenotypes
S Ashida, MS Orloff, G Bebek, L Zhang, P Zheng, DM Peehl, C Eng
Clinical Cancer Research 18 (6), 1578-1587, 2012
352012
PARP1 is up-regulated in non-small cell lung cancer tissues in the presence of the cyanobacterial toxin microcystin
PL Apopa, L Alley, RB Penney, K Arnaoutakis, MA Steliga, S Jeffus, ...
Frontiers in microbiology 9, 1757, 2018
292018
Hypomethylation of the MMP7 promoter and increased expression of MMP7 distinguishes the basal-like breast cancer subtype from other triple-negative tumors
ST Sizemore, GM Sizemore, CN Booth, CL Thompson, P Silverman, ...
Breast cancer research and treatment 146 (1), 25-40, 2014
222014
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Artikkelit 1–20