Kai Blin
Kai Blin
Researcher at the Novo Nordisk Foundation Center for Biosustainability
Verified email at biosustain.dtu.dk
Cited by
Cited by
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
T Weber, K Blin, S Duddela, D Krug, HU Kim, R Bruccoleri, SY Lee, ...
Nucleic acids research 43 (W1), W237-W243, 2015
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
MH Medema, K Blin, P Cimermancic, V De Jager, P Zakrzewski, ...
Nucleic acids research 39 (suppl_2), W339-W346, 2011
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
K Blin, S Shaw, K Steinke, R Villebro, N Ziemert, SY Lee, MH Medema, ...
Nucleic acids research 47 (W1), W81-W87, 2019
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification
K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ...
Nucleic acids research 45 (W1), W36-W41, 2017
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
K Blin, MH Medema, D Kazempour, MA Fischbach, R Breitling, E Takano, ...
Nucleic acids research 41 (W1), W204-W212, 2013
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
M Röttig, MH Medema, K Blin, T Weber, C Rausch, O Kohlbacher
Nucleic acids research 39 (suppl_2), W362-W367, 2011
Minimum information about a biosynthetic gene cluster
MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ...
Nature chemical biology 11 (9), 625-631, 2015
The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters
K Blin, MH Medema, R Kottmann, SY Lee, T Weber
Nucleic acids research, gkw960, 2016
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ...
Nucleic acids research 48 (D1), D454-D458, 2020
Dissemination of antibiotic resistance genes from antibiotic producers to pathogens
X Jiang, MMH Ellabaan, P Charusanti, C Munck, K Blin, Y Tong, T Weber, ...
Nature communications 8 (1), 1-7, 2017
DoRiNA 2.0—upgrading the doRiNA database of RNA interactions in post-transcriptional regulation
K Blin, C Dieterich, R Wurmus, N Rajewsky, M Landthaler, A Akalin
Nucleic acids research 43 (D1), D160-D167, 2015
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters
SA Kautsar, HG Suarez Duran, K Blin, A Osbourn, MH Medema
Nucleic acids research 45 (W1), W55-W63, 2017
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters
K Blin, V Pascal Andreu, ELC de los Santos, F Del Carratore, SY Lee, ...
Nucleic acids research 47 (D1), D625-D630, 2019
The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery
M Alanjary, B Kronmiller, M Adamek, K Blin, T Weber, D Huson, B Philmus, ...
Nucleic acids research 45 (W1), W42-W48, 2017
Ten Simple Rules for Taking Advantage of git and GitHub
Y Perez-Riverol, L Gatto, R Wang, T Sachsenberg, J Uszkoreit, ...
PLOS Computational Biology, 2016
CRISPy-web: an online resource to design sgRNAs for CRISPR applications
K Blin, LE Pedersen, T Weber, SY Lee
Synthetic and systems biotechnology 1 (2), 118-121, 2016
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters
K Blin, HU Kim, MH Medema, T Weber
Briefings in bioinformatics 20 (4), 1103-1113, 2019
Improved lanthipeptide detection and prediction for antiSMASH
K Blin, D Kazempour, W Wohlleben, T Weber
PLoS One 9 (2), e89420, 2014
Highly efficient DSB-free base editing for streptomycetes with CRISPR-BEST
Y Tong, CM Whitford, HL Robertsen, K Blin, TS Jørgensen, AK Klitgaard, ...
Proceedings of the National Academy of Sciences 116 (41), 20366-20375, 2019
ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining
MD Mungan, M Alanjary, K Blin, T Weber, MH Medema, N Ziemert
Nucleic acids research 48 (W1), W546-W552, 2020
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