| Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1800-1823, 2021 | 80 | 2021 |
| A deep dilated convolutional residual network for predicting interchain contacts of protein homodimers RS Roy, F Quadir, E Soltanikazemi, J Cheng Bioinformatics 38 (7), 1904-1910, 2022 | 35 | 2022 |
| DNCON2_Inter: predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learning F Quadir, RS Roy, R Halfmann, J Cheng Scientific reports 11 (1), 12295, 2021 | 27* | 2021 |
| Deep learning for reconstructing protein structures from cryo-EM density maps: Recent advances and future directions N Giri, RS Roy, J Cheng Current Opinion in Structural Biology 79, 102536, 2023 | 26 | 2023 |
| DeepComplex: a web server of predicting protein complex structures by deep learning inter-chain contact prediction and distance-based modelling F Quadir, RS Roy, E Soltanikazemi, J Cheng Frontiers in Molecular Biosciences 8, 716973, 2021 | 21 | 2021 |
| Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15 J Liu, Z Guo, T Wu, RS Roy, F Quadir, C Chen, J Cheng Communications Biology 6 (1), 1140, 2023 | 19 | 2023 |
| Impact of AlphaFold on structure prediction of protein complexes: the CASP15‐CAPRI experiment MF Lensink, G Brysbaert, N Raouraoua, PA Bates, M Giulini, RV Honorato, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1658-1683, 2023 | 16 | 2023 |
| Distance‐based reconstruction of protein quaternary structures from inter‐chain contacts E Soltanikazemi, F Quadir, RS Roy, Z Guo, J Cheng Proteins: Structure, Function, and Bioinformatics 90 (3), 720-731, 2022 | 13 | 2022 |
| Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15 J Liu, Z Guo, T Wu, RS Roy, C Chen, J Cheng Communications Chemistry 6 (1), 188, 2023 | 10 | 2023 |
| High-performance deep learning toolbox for genome-scale prediction of protein structure and function M Gao, P Lund-Andersen, A Morehead, S Mahmud, C Chen, X Chen, ... 2021 IEEE/ACM Workshop on Machine Learning in High Performance Computing …, 2021 | 10 | 2021 |
| Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15 RS Roy, J Liu, N Giri, Z Guo, J Cheng Proteins: Structure, Function, and Bioinformatics 91 (12), 1889-1902, 2023 | 9 | 2023 |
| A deep reinforcement learning approach to reconstructing quaternary structures of protein dimers through self-learning E Soltanikazemi, RS Roy, F Quadir, J Cheng bioRxiv, 2022.04. 17.488609, 2022 | 5* | 2022 |
| A Theoretical Approach of Fall Control System for Disable People Using Double Inverted Pendulum MR Rashid, NKD Shuvra, RS Roy, S Sarker 2018 4th International Conference on Electrical Engineering and Information …, 2018 | 2* | 2018 |
| Deep learning systems and methods for predicting structural aspects of protein-related complexes J Cheng, E Soltanikazemi, RS Roy, F Quadir US Patent App. 17/988,461, 2023 | | 2023 |
Jianlin ChengCurators' Distinguished Professor and Thompson Distinguished Professor, University of MissouriVerified email at missouri.edu
