| OpenWorm: an open-science approach to modeling Caenorhabditis elegans B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ... Frontiers in computational neuroscience 8, 137, 2014 | 181 | 2014 |
| OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans GP Sarma, CW Lee, T Portegys, V Ghayoomie, T Jacobs, B Alicea, ... Philosophical Transactions of the Royal Society B 373 (1758), 20170382, 2018 | 134 | 2018 |
| Towards a virtual C. elegans: A framework for simulation and visualization of the neuromuscular system in a 3D physical environment A Palyanov, S Khayrulin, SD Larson, A Dibert In silico biology 11 (3-4), 137-147, 2012 | 49 | 2012 |
| Application of smoothed particle hydrodynamics to modeling mechanisms of biological tissue A Palyanov, S Khayrulin, SD Larson Advances in Engineering Software 98, 1-11, 2016 | 47 | 2016 |
| Three-dimensional simulation of the Caenorhabditis elegans body and muscle cells in liquid and gel environments for behavioural analysis A Palyanov, S Khayrulin, SD Larson Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 37 | 2018 |
| Software tools for cell walls segmentation in microphotography GB Abdikerimova, J Tussupov, FA Murzin, S Khayrulin, AL Bychkov, ... Journal of Theoretical and Applied Information Technology 96 (15), 4783-4793, 2018 | 12 | 2018 |
| Analysis of images obtained by the transmission electronic microscopy GB Abdikerimova, AL Bychkov, SS Khayrulin, FA Murzin, NE Russkikh, ... Materials Today: Proceedings 12, 90-92, 2019 | 9 | 2019 |
| The OpenWorm Project: currently available resources and future plans P Gleeson, M Cantarelli, M Currie, J Hokanson, G Idili, S Khayrulin, ... BMC neuroscience 16 (Suppl 1), P141, 2015 | 7 | 2015 |
| The NeuroML C. elegans connectome T Busbice, P Gleeson, S Khayrulin, M Cantarelli, A Dibert, G Idili, ... Neuroinf. Abstract book, 82-83, 2012 | 7 | 2012 |
| Sibernetic: A software complex based on the PCI SPH algorithm aimed at simulation problems in biomechanics AY Palyanov, SS Khayrulin Russian Journal of Genetics: Applied Research 5, 635-641, 2015 | 6 | 2015 |
| Integration of predictive-corrective incompressible SPH and Hodgkin-Huxley based models in the OpenWorm in silico model of C. elegans M Vella, A Palyanov, P Gleeson, S Khayrulin BMC Neuroscience 14, 1-1, 2013 | 5 | 2013 |
| OpenWorm: an open-science approach to modeling caenorhabditis elegans. Frontiers Computational Neuroscience 2014; 8 B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ... | 4 | 2014 |
| Managing complexity in multi-algorithm, multi-scale biological simulations: an integrated software engineering and neuroinformatics approach G Idili, M Cantarelli, M Buibas, T Busbice, J Coggan, C Grove, S Khayrulin, ... Frontiers in Neuroinformatics Conference Abstract: 4th INCF Congress of …, 2011 | 3 | 2011 |
| A Simplified Cell Network for the Simulation of C. elegans' Forward Crawling D Lung, S Larson, A Palyanov, S Khayrulin, P Gleeson, M Zimmer, ... Proceedings of the Workshop on Worm´ s Neural Information Processing at the …, 2017 | 1 | 2017 |
| Realistic 3D simulation of C. elegans swimming and crawling with Sibernetic environment A Palyanov, S Khayrulin Proc. of the 2nd International Conference” Mathematical modeling and High …, 2016 | 1 | 2016 |
| Distributed calculations on multiple independent devices for PCISPH method S Khayrulin Bulletin of the Novosibirsk Computing Center. Series: Computer Science, 59-68, 2021 | | 2021 |
| Algorithms of distributed computation on heterogeneous systems with many devices for PCI SPH methods SS Khayrulin Марчуковские научные чтения, 183-184, 2020 | | 2020 |
| Algorithms and software tools for analysis of textural images GB Abdikerimova, AL Bychkov, W Xinyu, FA Murzin, NE Russkikh, ... Science Intensive Software, 6-13, 2019 | | 2019 |
| PROCESSING IMAGES OBTAINED BY THE TRANSMISSION ELECTRON MICROSCOPY GB Abdikerimova, AL Bychkov, SS Khayrulin, FA Murzin, NE Russkikh, ... Fundamental Bases of Mechanochemical Technologies, 52-52, 2018 | | 2018 |
| A SOFTWARE TOOL FOR VISUALIZATION AND CONTROL OF BIOLOGICAL NEURAL NETWORKS ACTIVITY BASED ON THE NEURON SIMULATION ENVIRONMENT SS Khayrulin, NA Serdtseva, AY Palyanov AND HIGH pERFORMANCE COMpUTING IN BIOINFORMATICS, BIOMEDICINE AND …, 2016 | | 2016 |
Andrey PalyanovA.P. Ershov Intitute of Informatics SystemsVerified email at iis.nsk.su
