| Identifying signaling genes in spatial single cell expression data D Li, J Ding, Z Bar-Joseph Bioinformatics, 2020 | 39 | 2020 |
| Quantifying the impact of non-coding variants on transcription factor-DNA binding J Zhao*, D Li*, J Seo, AS Allen, R Gordân International Conference on Research in Computational Molecular Biology, 336-352, 2017 | 28 | 2017 |
| SCS: cell segmentation for high-resolution spatial transcriptomics H Chen, D Li, Z Bar-Joseph Nature Methods, 2023 | 15 | 2023 |
| TraSig: inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data D Li, JJ Velazquez, J Ding, J Hislop, MR Ebrahimkhani, Z Bar-Joseph Genome biology 23 (1), 73, 2022 | 12 | 2022 |
| Unsupervised cell functional annotation for single-cell RNA-seq D Li, J Ding, Z Bar-Joseph Genome Research 32 (9), 1765-1775, 2022 | 3 | 2022 |
| Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data D Li*, JJ Velazquez*, J Ding, J Hislop, MR Ebrahimkhani, Z Bar-Joseph bioRxiv, 2021 | 3 | 2021 |
| Cell segmentation for high-resolution spatial transcriptomics H Chen, D Li, Z Bar-Joseph Research in Computational Molecular Biology: 27th Annual International …, 2023 | | 2023 |
