Denis Tolkunov
Denis Tolkunov
Bioinformatics, Berkeley Lab
Verified email at lbl.gov
Title
Cited by
Cited by
Year
Chemosensory cues to conspecific emotional stress activate amygdala in humans
LR Mujica-Parodi, HH Strey, B Frederick, R Savoy, D Cox, Y Botanov, ...
PloS one 4 (7), e6415, 2009
2572009
The genomic landscape of renal oncocytoma identifies a metabolic barrier to tumorigenesis
S Joshi, D Tolkunov, H Aviv, AA Hakimi, M Yao, JJ Hsieh, S Ganesan, ...
Cell reports 13 (9), 1895-1908, 2015
1142015
High-throughput sequencing reveals a simple model of nucleosome energetics
G Locke, D Tolkunov, Z Moqtaderi, K Struhl, AV Morozov
Proceedings of the National Academy of Sciences 107 (49), 20998-21003, 2010
782010
Decoherence of a measure of entanglement
D Tolkunov, V Privman, PK Aravind
Physical Review A 71 (6), 060308, 2005
732005
Short-time decoherence for general system-environment interactions
D Tolkunov, V Privman
Physical Review A 69 (6), 062309, 2004
732004
Power spectrum scale invariance quantifies limbic dysregulation in trait anxious adults using fMRI: adapting methods optimized for characterizing autonomic dysregulation to …
D Tolkunov, D Rubin, LR Mujica-Parodi
Neuroimage 50 (1), 72-80, 2010
722010
Statistical mechanics of nucleosome ordering by chromatin-structure-induced two-body interactions
RV Chereji, D Tolkunov, G Locke, AV Morozov
Physical Review E 83 (5), 050903, 2011
642011
Clinical Actionability of Comprehensive Genomic Profiling for Management of Rare or Refractory Cancers
KM Hirshfield, D Tolkunov, H Zhong, SM Ali, MN Stein, S Murphy, H Vig, ...
The Oncologist 21, 1-11, 2016
482016
Quantum phase transition in the multimode Dicke model
D Tolkunov, D Solenov
Physical Review B 75 (2), 024402, 2007
482007
Exchange interaction, entanglement, and quantum noise due to a thermal bosonic field
D Solenov, D Tolkunov, V Privman
Physical Review B 75 (3), 035134, 2007
452007
Chromatin remodelers clear nucleosomes from intrinsically unfavorable sites to establish nucleosome-depleted regions at promoters
D Tolkunov, KA Zawadzki, C Singer, N Elfving, AV Morozov, JR Broach
Molecular biology of the cell 22 (12), 2106-2118, 2011
342011
Whole-genome sequencing analysis of phenotypic heterogeneity and anticipation in Li–Fraumeni cancer predisposition syndrome
H Ariffin, P Hainaut, A Puzio-Kuter, SS Choong, ASL Chan, D Tolkunov, ...
Proceedings of the National Academy of Sciences 111 (43), 15497-15501, 2014
332014
Stability of quantum breathers
LS Schulman, D Tolkunov, E Mihokova
Physical review letters 96 (6), 065501, 2006
282006
Genomic studies and computational predictions of nucleosome positions and formation energies
D Tolkunov, AV Morozov
Advances in protein chemistry and structural biology 79, 1-57, 2010
262010
Coherent interaction of spins induced by thermal bosonic environment
D Solenov, D Tolkunov, V Privman
Physics Letters A 359 (2), 81-85, 2006
252006
Structure and time-dependence of quantum breathers
LS Schulman, D Tolkunov, E Mihóková
Chemical physics 322 (1-2), 55-74, 2006
212006
DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor
GM Turco, K Kajala, G Kunde‐Ramamoorthy, CY Ngan, A Olson, ...
New Phytologist 214 (3), 1213-1229, 2017
202017
Second-hand stress: neurobiological evidence for a human alarm pheromone
L Mujica-Parodi, H Strey, B Frederick, R Savoy, D Cox, Y Botanov, ...
Nature Precedings, 1-1, 2008
102008
Single temperature for Monte Carlo optimization on complex landscapes
D Tolkunov, AV Morozov
Physical review letters 108 (25), 250602, 2012
62012
Localization by entanglement
J Brand, S Flach, V Fleurov, LS Schulman, D Tolkunov
EPL (Europhysics Letters) 83 (4), 40002, 2008
42008
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Articles 1–20