| Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer YK Kim, J Yu, TS Han, SY Park, B Namkoong, DH Kim, K Hur, MW Yoo, ... Nucleic acids research 37 (5), 1672-1681, 2009 | 582 | 2009 |
| Deciphering Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli SW Seo, D Kim, H Latif, EJ O’Brien, R Szubin, BO Palsson Nature Communications 5, 2014 | 323 | 2014 |
| Network context and selection in the evolution to enzyme specificity H Nam, NE Lewis, JA Lerman, DH Lee, RL Chang, D Kim, BO Palsson Science 337 (6098), 1101-1104, 2012 | 315 | 2012 |
| The Escherichia coli transcriptome mostly consists of independently regulated modules AV Sastry, Y Gao, R Szubin, Y Hefner, S Xu, D Kim, KS Choudhary, ... Nature communications 10 (1), 5536, 2019 | 211 | 2019 |
| Genome-wide reconstruction of OxyR and SoxRS transcriptional regulatory networks under oxidative stress in Escherichia coli K-12 MG1655 SW Seo, D Kim, R Szubin, BO Palsson Cell reports 12 (8), 1289-1299, 2015 | 202 | 2015 |
| Multi-omic data integration enables discovery of hidden biological regularities A Ebrahim, E Brunk, J Tan, EJ O'brien, D Kim, R Szubin, JA Lerman, ... Nature communications 7 (1), 13091, 2016 | 172 | 2016 |
| Comparative Analysis of Regulatory Elements between Escherichia coli and Klebsiella pneumoniae by Genome-Wide Transcription Start Site Profiling D Kim, JSJ Hong, Y Qiu, H Nagarajan, JH Seo, BK Cho, SF Tsai, ... Public Library of Science 8 (8), e1002867, 2012 | 167 | 2012 |
| Structural systems biology evaluation of metabolic thermotolerance in Escherichia coli RL Chang, K Andrews, D Kim, Z Li, A Godzik, BO Palsson Science 340 (6137), 1220-1223, 2013 | 145 | 2013 |
| Genome-scale reconstruction of the sigma factor network in Escherichia coli: topology and functional states BK Cho, D Kim, EM Knight, K Zengler, BO Palsson BMC biology 12 (1), 1, 2014 | 137 | 2014 |
| The PurR regulon in Escherichia coli K-12 MG1655 BK Cho, SA Federowicz, M Embree, YS Park, D Kim, BØ Palsson Nucleic acids research 39 (15), 6456-6464, 2011 | 136 | 2011 |
| Functional cooperation of the glycine synthase-reductase and Wood–Ljungdahl pathways for autotrophic growth of Clostridium drakei Y Song, JS Lee, J Shin, GM Lee, S Jin, S Kang, JK Lee, DR Kim, EY Lee, ... Proceedings of the National Academy of Sciences 117 (13), 7516-7523, 2020 | 127 | 2020 |
| Decoding genome-wide GadEWX-transcriptional regulatory networks reveals multifaceted cellular responses to acid stress in Escherichia coli SW Seo, D Kim, EJ O’Brien, R Szubin, BO Palsson Nature communications 6 (1), 7970, 2015 | 114 | 2015 |
| Global transcriptional regulatory network for Escherichia coli robustly connects gene expression to transcription factor activities X Fang, A Sastry, N Mih, D Kim, J Tan, JT Yurkovich, CJ Lloyd, Y Gao, ... Proceedings of the National Academy of Sciences 114 (38), 10286-10291, 2017 | 113 | 2017 |
| Systematic metabolic engineering of Methylomicrobium alcaliphilum 20Z for 2, 3-butanediol production from methane AD Nguyen, IY Hwang, OK Lee, D Kim, MG Kalyuzhnaya, R Mariyana, ... Metabolic engineering 47, 323-333, 2018 | 112 | 2018 |
| Cellular responses to reactive oxygen species are predicted from molecular mechanisms L Yang, N Mih, A Anand, JH Park, J Tan, JT Yurkovich, JM Monk, CJ Lloyd, ... Proceedings of the National Academy of Sciences 116 (28), 14368-14373, 2019 | 106 | 2019 |
| Systematic discovery of uncharacterized transcription factors in Escherichia coli K-12 MG1655 Y Gao, JT Yurkovich, SW Seo, I Kabimoldayev, A Dräger, K Chen, ... Nucleic Acids Research 46 (20), 10682-10696, 2018 | 103 | 2018 |
| Systems assessment of transcriptional regulation on central carbon metabolism by Cra and CRP D Kim, SW Seo, Y Gao, H Nam, GI Guzman, BK Cho, BO Palsson Nucleic acids research 46 (6), 2901-2917, 2018 | 92 | 2018 |
| Determining the control circuitry of redox metabolism at the genome-scale S Federowicz, D Kim, A Ebrahim, J Lerman, H Nagarajan, B Cho, ... PLoS genetics 10 (4), e1004264, 2014 | 86 | 2014 |
| Prevalence of extended-spectrum β-lactamases in the local farm environment and livestock: challenges to mitigate antimicrobial resistance S Lee, RA Mir, SH Park, D Kim, HY Kim, RK Boughton, JG Morris Jr, ... Critical reviews in microbiology 46 (1), 1-14, 2020 | 76 | 2020 |
| Rice pectin methylesterase inhibitor28 (OsPMEI28) encodes a functional PMEI and its overexpression results in a dwarf phenotype through increased pectin methylesterification levels HP Nguyen, HY Jeong, SH Jeon, D Kim, C Lee Journal of Plant Physiology 208, 17-25, 2017 | 54 | 2017 |
Byung-Kwan ChoBiological Sciences, KAISTVerified email at kaist.ac.kr
