| Why, when and how to adjust your p values? M Jafari, N Ansari-Pour Cell Journal (Yakhteh) 20 (4), 604, 2019 | 388 | 2019 |
| Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd Z Wang, CD Monteiro, KM Jagodnik, NF Fernandez, GW Gundersen, ... Nature communications 7 (1), 12846, 2016 | 238 | 2016 |
| A systematic survey of centrality measures for protein-protein interaction networks M Ashtiani, A Salehzadeh-Yazdi, Z Razaghi-Moghadam, H Hennig, ... BMC systems biology 12 (1), 1-17, 2018 | 154 | 2018 |
| DrugComb: an integrative cancer drug combination data portal B Zagidullin, J Aldahdooh, S Zheng, W Wang, Y Wang, J Saad, ... Nucleic Acids Research, gkz337, 2019 | 144 | 2019 |
| Updates on drug–target network; facilitating polypharmacology and data integration by growth of DrugBank database F Barneh, M Jafari, M Mirzaie Briefings in bioinformatics 17 (6), 1070-1080, 2016 | 61 | 2016 |
| Network-based modeling of herb combinations in Traditional Chinese Medicine Y Wang, H Yang, L Chen, M Jafari, J Tang Briefings in Bioinformatics, bbab106, 2021 | 59 | 2021 |
| Proteomics of hot-wet and cold-dry temperaments proposed in Iranian traditional medicine: a Network-based Study H Rezadoost, M Karimi, M Jafari Scientific reports 6 (1), 30133, 2016 | 52 | 2016 |
| CINNA: An R/CRAN package to decipher Central Informa-tive Nodes in Network Analysis M Ashtiani, M Mirzaie, M Jafari Bioinformatics, 2018 | 51* | 2018 |
| Comparison of in‐gel protein separation techniques commonly used for fractionation in mass spectrometry‐based proteomic profiling M Jafari, V Primo, GB Smejkal, EV Moskovets, WP Kuo, AR Ivanov Electrophoresis 33 (16), 2516-2526, 2012 | 48 | 2012 |
| Phytosomal‐curcumin antagonizes cell growth and migration, induced by thrombin through AMP‐Kinase in breast cancer M Hashemzehi, R Behnam‐Rassouli, SM Hassanian, M Moradi‐Binabaj, ... Journal of cellular biochemistry 119 (7), 5996-6007, 2018 | 43 | 2018 |
| Predicting Meridian in Chinese traditional medicine using machine learning approaches Y Wang, M Jafari, Y Tang, J Tang PLOS Computational Biology 15 (11), e1007249, 2019 | 38 | 2019 |
| Distorted expression of dopamine receptor genes in systemic lupus erythematosus M Jafari, G Ahangari, M Saberi, S Samangoui Immunobiology 218 (7), 979-983, 2013 | 37 | 2013 |
| Human T‐lymphotropic virus 1 (HTLV‐1) pathogenesis: A systems virology study SH Mozhgani, M Zarei‐Ghobadi, M Teymoori‐Rad, T Mokhtari‐Azad, ... Journal of cellular biochemistry 119 (5), 3968-3979, 2018 | 36 | 2018 |
| Rigosertib potently protects against colitis-associated intestinal fibrosis and inflammation by regulating PI3K/AKT and NF-κB signaling pathways F Rahmani, F Asgharzadeh, A Avan, F Barneh, MR Parizadeh, GA Ferns, ... Life sciences 249, 117470, 2020 | 35 | 2020 |
| Signaling network of lipids as a comprehensive scaffold for omics data integration in sputum of COPD patients SA Jamalkandi, M Mirzaie, M Jafari, H Mehrani, P Shariati, ... Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2015 | 32 | 2015 |
| Efficacy of Persian medicine herbal formulations (capsules and decoction) compared to standard care in patients with COVID‐19, a multicenter open‐labeled, randomized … M Karimi, A Zarei, S Soleymani, S Jamalimoghadamsiahkali, A Asadi, ... Phytotherapy research 35 (11), 6295-6309, 2021 | 30 | 2021 |
| A community challenge for a pancancer drug mechanism of action inference from perturbational profile data EF Douglass, RJ Allaway, B Szalai, W Wang, T Tian, A Fernández-Torras, ... Cell Reports Medicine 3 (1), 2022 | 29 | 2022 |
| Unsupervised learning and multipartite network models: a promising approach for understanding traditional medicine M Jafari, Y Wang, A Amiryousefi, J Tang Frontiers in Pharmacology 11, 1319, 2020 | 29 | 2020 |
| Systems biomedicine of rabies delineates the affected signaling pathways S Azimzadeh Jamalkandi, SH Mozhgani, H Gholami Pourbadie, ... Frontiers in microbiology 7, 1688, 2016 | 23 | 2016 |
| An insight to HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP) pathogenesis; evidence from high-throughput data integration and meta-analysis SH Mozhgani, M Piran, M Zarei-Ghobadi, M Jafari, SM Jazayeri, ... Retrovirology 16, 1-11, 2019 | 21 | 2019 |
Mehdi MirzaieUniversity of HelsinkiVerified email at helsinki.fi
