Mohieddin Jafari
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Why, when and how to adjust your p values?
M Jafari, N Ansari-Pour
Cell Journal (Yakhteh) 20 (4), 604, 2019
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
Z Wang, CD Monteiro, KM Jagodnik, NF Fernandez, GW Gundersen, ...
Nature communications 7 (1), 1-11, 2016
A systematic survey of centrality measures for protein-protein interaction networks
M Ashtiani, A Salehzadeh-Yazdi, Z Razaghi-Moghadam, H Hennig, ...
BMC systems biology 12 (1), 1-17, 2018
DrugComb: an integrative cancer drug combination data portal
B Zagidullin, J Aldahdooh, S Zheng, W Wang, Y Wang, J Saad, ...
Nucleic Acids Research, gkz337, 2019
Updates on drug–target network; facilitating polypharmacology and data integration by growth of DrugBank database
F Barneh, M Jafari, M Mirzaie
Briefings in bioinformatics 17 (6), 1070-1080, 2016
Proteomics of hot-wet and cold-dry temperaments proposed in Iranian traditional medicine: a Network-based Study
H Rezadoost, M Karimi, M Jafari
Scientific reports 6 (1), 1-8, 2016
Comparison of in‐gel protein separation techniques commonly used for fractionation in mass spectrometry‐based proteomic profiling
M Jafari, V Primo, GB Smejkal, EV Moskovets, WP Kuo, AR Ivanov
Electrophoresis 33 (16), 2516-2526, 2012
CINNA: An R/CRAN package to decipher Central Informa-tive Nodes in Network Analysis
M Ashtiani, M Mirzaie, M Jafari
Bioinformatics, 2018
Phytosomal‐curcumin antagonizes cell growth and migration, induced by thrombin through AMP‐Kinase in breast cancer
M Hashemzehi, R Behnam‐Rassouli, SM Hassanian, M Moradi‐Binabaj, ...
Journal of cellular biochemistry 119 (7), 5996-6007, 2018
Human T‐lymphotropic virus 1 (HTLV‐1) pathogenesis: A systems virology study
SH Mozhgani, M Zarei‐Ghobadi, M Teymoori‐Rad, T Mokhtari‐Azad, ...
Journal of cellular biochemistry 119 (5), 3968-3979, 2018
Signaling network of lipids as a comprehensive scaffold for omics data integration in sputum of COPD patients
SA Jamalkandi, M Mirzaie, M Jafari, H Mehrani, P Shariati, ...
Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2015
Distorted expression of dopamine receptor genes in systemic lupus erythematosus
M Jafari, G Ahangari, M Saberi, S Samangoui
Immunobiology 218 (7), 979-983, 2013
Predicting Meridian in Chinese traditional medicine using machine learning approaches
Y Wang, M Jafari, Y Tang, J Tang
PLOS Computational Biology 15 (11), e1007249, 2019
Proteomics and traditional medicine: new aspect in explanation of temperaments
M Jafari, H Rezadoost, M Karimi, M Mirzaie, M Rezaie-Tavirani, ...
Complementary Medicine Research 21 (4), 250-253, 2014
Systems biomedicine of rabies delineates the affected signaling pathways
S Azimzadeh Jamalkandi, SH Mozhgani, H Gholami Pourbadie, ...
Frontiers in microbiology 7, 1688, 2016
Evolutionarily conserved motifs and modules in mitochondrial protein–protein interaction networks
M Jafari, M Sadeghi, M Mirzaie, SA Marashi, M Rezaei-Tavirani
Mitochondrion 13 (6), 668-675, 2013
Unsupervised learning and multipartite network models: a promising approach for understanding traditional medicine
M Jafari, Y Wang, A Amiryousefi, J Tang
Frontiers in Pharmacology 11, 1319, 2020
Rigosertib potently protects against colitis-associated intestinal fibrosis and inflammation by regulating PI3K/AKT and NF-κB signaling pathways
F Rahmani, F Asgharzadeh, A Avan, F Barneh, MR Parizadeh, GA Ferns, ...
Life sciences 249, 117470, 2020
A logic-based dynamic modeling approach to explicate the evolution of the central dogma of molecular biology
M Jafari, N Ansari-Pour, S Azimzadeh, M Mirzaie
PloS one 12 (12), e0189922, 2017
Integrated use of bioinformatic resources reveals that co-targeting of histone deacetylases, IKBK and SRC inhibits epithelial-mesenchymal transition in cancer
F Barneh, M Mirzaie, P Nickchi, TZ Tan, JP Thiery, M Piran, M Salimi, ...
Briefings in bioinformatics 20 (2), 717-731, 2019
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