Mohieddin Jafari
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Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
Z Wang, CD Monteiro, KM Jagodnik, NF Fernandez, GW Gundersen, ...
Nature communications 7 (1), 1-11, 2016
Updates on drug–target network; facilitating polypharmacology and data integration by growth of DrugBank database
F Barneh, M Jafari, M Mirzaie
Briefings in bioinformatics 17 (6), 1070-1080, 2016
Why, when and how to adjust your p values?
M Jafari, N Ansari-Pour
Cell Journal (Yakhteh) 20 (4), 604, 2019
A systematic survey of centrality measures for protein-protein interaction networks
M Ashtiani, A Salehzadeh-Yazdi, Z Razaghi-Moghadam, H Hennig, ...
BMC systems biology 12 (1), 80, 2018
Comparison of in‐gel protein separation techniques commonly used for fractionation in mass spectrometry‐based proteomic profiling
M Jafari, V Primo, GB Smejkal, EV Moskovets, WP Kuo, AR Ivanov
Electrophoresis 33 (16), 2516-2526, 2012
Proteomics of hot-wet and cold-dry temperaments proposed in Iranian traditional medicine: a Network-based Study
H Rezadoost, M Karimi, M Jafari
Scientific reports 6 (1), 1-8, 2016
Distorted expression of dopamine receptor genes in systemic lupus erythematosus
M Jafari, G Ahangari, M Saberi, S Samangoui
Immunobiology 218 (7), 979-983, 2013
Signaling network of lipids as a comprehensive scaffold for omics data integration in sputum of COPD patients
SA Jamalkandi, M Mirzaie, M Jafari, H Mehrani, P Shariati, ...
Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2015
Phytosomal‐curcumin antagonizes cell growth and migration, induced by thrombin through AMP‐Kinase in breast cancer
M Hashemzehi, R Behnam‐Rassouli, SM Hassanian, M Moradi‐Binabaj, ...
Journal of cellular biochemistry 119 (7), 5996-6007, 2018
DrugComb: an integrative cancer drug combination data portal
B Zagidullin, J Aldahdooh, S Zheng, W Wang, Y Wang, J Saad, ...
Nucleic Acids Research, gkz337, 2019
Evolutionarily conserved motifs and modules in mitochondrial protein–protein interaction networks
M Jafari, M Sadeghi, M Mirzaie, SA Marashi, M Rezaei-Tavirani
Mitochondrion 13 (6), 668-675, 2013
Human T‐lymphotropic virus 1 (HTLV‐1) pathogenesis: A systems virology study
SH Mozhgani, M Zarei‐Ghobadi, M Teymoori‐Rad, T Mokhtari‐Azad, ...
Journal of cellular biochemistry 119 (5), 3968-3979, 2018
Proteomics and traditional medicine: new aspect in explanation of temperaments
M Jafari, H Rezadoost, M Karimi, M Mirzaie, M Rezaie-Tavirani, ...
Complementary Medicine Research 21 (4), 250-253, 2014
Testis-specific Y-centric protein–protein interaction network provides clues to the etiology of severe spermatogenic failure
N Ansari-Pour, Z Razaghi-Moghadam, F Barneh, M Jafari
Journal of proteome research 15 (3), 1011-1022, 2016
Atopic dermatitis-associated protein interaction network lead to new insights in chronic sulfur mustard skin lesion mechanisms
M Amiri, M Jafari, S Azimzadeh Jamalkandi, SM Davoodi, .
Expert Review of Proteomics 10 (5), 449-460, 2013
Exploring biological processes involved in embryonic stem cell differentiation by analyzing proteomics data
M Jafari, M Mirzaie, M Sadeghi, SA Marashi, M Rezaei-Tavirani
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1834 (6), 1063-1069, 2013
CINNA: An R/CRAN package to decipher Central Informa-tive Nodes in Network Analysis
M Ashtiani, M Mirzaie, M Jafari
Bioinformatics, 2018
A logic-based dynamic modeling approach to explicate the evolution of the central dogma of molecular biology
M Jafari, N Ansari-Pour, S Azimzadeh, M Mirzaie
PloS one 12 (12), e0189922, 2017
Interlog protein network: an evolutionary benchmark of protein interaction networks for the evaluation of clustering algorithms
M Jafari, M Mirzaie, M Sadeghi
BMC bioinformatics 16 (1), 1-9, 2015
Valproic acid inhibits the protective effects of stromal cells against chemotherapy in breast cancer: Insights from proteomics and systems biology
F Barneh, M Salimi, F Goshadrou, M Ashtiani, M Mirzaie, H Zali, M Jafari
Journal of cellular biochemistry 119 (11), 9270-9283, 2018
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