The Genomes of Oryza sativa: A History of Duplications J Yu, J Wang, W Lin, S Li, H Li, J Zhou, P Ni, W Dong, S Hu, C Zeng, ... PLoS biology 3 (2), e38, 2005 | 1034 | 2005 |
An update of DIVERGE software for functional divergence analysis of protein family X Gu, Y Zou, Z Su, W Huang, Z Zhou, Z Arendsee, Y Zeng Molecular biology and evolution 30 (7), 1713-1719, 2013 | 192 | 2013 |
Evolution of alternative splicing after gene duplication Z Su, J Wang, J Yu, X Huang, X Gu Genome research 16 (2), 182-189, 2006 | 178 | 2006 |
DeepHLApan: a deep learning approach for neoantigen prediction considering both HLA-peptide binding and immunogenicity J Wu, W Wang, J Zhang, B Zhou, W Zhao, Z Su, X Gu, J Wu, Z Zhou, ... Frontiers in immunology 10, 2559, 2019 | 110 | 2019 |
TSNAdb: a database for tumor-specific neoantigens from immunogenomics data analysis J Wu, W Zhao, B Zhou, Z Su, X Gu, Z Zhou, S Chen Genomics, Proteomics and Bioinformatics 16 (4), 276-282, 2018 | 97 | 2018 |
Tissue-driven hypothesis of genomic evolution and sequence-expression correlations X Gu, Z Su Proceedings of the National Academy of Sciences 104 (8), 2779-2784, 2007 | 79 | 2007 |
Conservation and divergence of DNA methylation in eukaryotes: new insights from single base-resolution DNA methylomes Z Su, L Han, Z Zhao Epigenetics 6 (2), 134-140, 2011 | 77 | 2011 |
TSNAD: an integrated software for cancer somatic mutation and tumour-specific neoantigen detection Z Zhou, X Lyu, J Wu, X Yang, S Wu, J Zhou, X Gu, Z Su, S Chen Royal Society open science 4 (4), 170050, 2017 | 70 | 2017 |
Identification of functional mutations in GATA4 in patients with congenital heart disease E Wang, S Sun, B Qiao, W Duan, G Huang, Y An, S Xu, Y Zheng, Z Su, ... PloS one 8 (4), e62138, 2013 | 66 | 2013 |
Functional complementation between transcriptional methylation regulation and post-transcriptional microRNA regulation in the human genome Z Su, J Xia, Z Zhao BMC genomics 12, 1-11, 2011 | 65 | 2011 |
A multilocus blood-based assay targeting circulating tumor DNA methylation enables early detection and early relapse prediction of colorectal cancer G Cai, M Cai, Z Feng, R Liu, L Liang, P Zhou, B Zhu, S Mo, H Wang, X Lan, ... Gastroenterology 161 (6), 2053-2056. e2, 2021 | 51 | 2021 |
Evolution of the class C GPCR Venus flytrap modules involved positive selected functional divergence J Cao, S Huang, J Qian, J Huang, L Jin, Z Su, J Yang, J Liu BMC evolutionary biology 9, 1-12, 2009 | 51 | 2009 |
Early detection and prognosis prediction for colorectal cancer by circulating tumour DNA methylation haplotypes: A multicentre cohort study S Mo, W Dai, H Wang, X Lan, C Ma, Z Su, W Xiang, L Han, W Luo, ... EClinicalMedicine 55, 2023 | 40 | 2023 |
A preliminary analysis of gene pleiotropy estimated from protein sequences Z Su, Y Zeng, X Gu Journal of Experimental Zoology Part B: Molecular and Developmental …, 2010 | 37 | 2010 |
Revisit on the evolutionary relationship between alternative splicing and gene duplication Z Su, X Gu Gene 504 (1), 102-106, 2012 | 28 | 2012 |
Fecal multidimensional assay for non-invasive detection of colorectal cancer: fecal immunochemical test, stool DNA mutation, methylation, and intestinal bacteria analysis S Mo, H Wang, L Han, W Xiang, W Dai, P Zhao, F Pei, Z Su, C Ma, Q Li, ... Frontiers in Oncology 11, 643136, 2021 | 26 | 2021 |
The impact of DNA methylation dynamics on the mutation rate during human germline development Y Zhou, F He, W Pu, X Gu, J Wang, Z Su G3: Genes, Genomes, Genetics 10 (9), 3337-3346, 2020 | 26 | 2020 |
Predicting the proportion of essential genes in mouse duplicates based on biased mouse knockout genes Z Su, X Gu Journal of molecular evolution 67, 705-709, 2008 | 25 | 2008 |
Integrative analysis of somatic mutations in non-coding regions altering RNA secondary structures in cancer genomes F He, R Wei, Z Zhou, L Huang, Y Wang, J Tang, Y Zou, L Shi, X Gu, ... Scientific reports 9 (1), 8205, 2019 | 24 | 2019 |
Comprehensive analysis reveals distinct mutational signature and its mechanistic insights of alcohol consumption in human cancers R Wei, P Li, F He, G Wei, Z Zhou, Z Su, T Ni Briefings in Bioinformatics 22 (3), bbaa066, 2021 | 19 | 2021 |