Xiaofeng Yu
Xiaofeng Yu
Vahvistettu sähköpostiosoite verkkotunnuksessa h-its.org - Kotisivu
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Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
862016
Conformational diversity and ligand tunnels of mammalian cytochrome P 450s
X Yu, V Cojocaru, RC Wade
Biotechnology and applied biochemistry 60 (1), 134-145, 2013
452013
SDA 7: A modular and parallel implementation of the simulation of diffusional association software
M Martinez, NJ Bruce, J Romanowska, DB Kokh, M Ozboyaci, X Yu, ...
Journal of computational chemistry 36 (21), 1631-1645, 2015
332015
Dynamics of CYP51: implications for function and inhibitor design
X Yu, V Cojocaru, G Mustafa, OMH Salo‐Ahen, GI Lepesheva, RC Wade
Journal of Molecular Recognition 28 (2), 59-73, 2015
252015
Ligand tunnels in T. brucei and human CYP51: Insights for parasite-specific drug design
X Yu, P Nandekar, G Mustafa, V Cojocaru, GI Lepesheva, RC Wade
Biochimica et Biophysica Acta (BBA)-General Subjects 1860 (1), 67-78, 2016
212016
On the application of the MARTINI coarse-grained model to immersion of a protein in a phospholipid bilayer
G Mustafa, PP Nandekar, X Yu, RC Wade
The Journal of chemical physics 143 (24), 12B621_1, 2015
152015
Structure and dynamics of human drug-metabolizing cytochrome P450 enzymes
G Mustafa, X Yu, RC Wade
Drug metabolism prediction 63, 77-102, 2014
62014
webSDA: a web server to simulate macromolecular diffusional association
X Yu, M Martinez, AL Gable, JC Fuller, NJ Bruce, S Richter, RC Wade
Nucleic acids research 43 (W1), W220-W224, 2015
52015
Dynathor: dynamics of the complex of cytochrome P450 and cytochrome P450 reductase in a phospholipid bilayer
X Yu, DB Kokh, P Nandekar, G Mustafa, S Richter, RC Wade
High Performance Computing in Science and Engineering´ 15, 255-264, 2016
32016
Multiscale Simulations of Cytochrome P450 Systems
X Yu
2015
Simulation of Diffusional Association 7 (SDA 7): Brownian Dynamics Simulations of Biomacromolecular Association
NJ Bruce, M Martinez, X Yu, J Romanowska, DB Kokh, M Oztürk, ...
Computational Trends in Solvation and Transport in Liquids, 39, 0
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Artikkelit 1–11