Zhou (Jason) Shi
Zhou (Jason) Shi
Postdoc, UCSF Gladstone Institutes; Junior Research Scholar, CZ Biohub
Vahvistettu sähköpostiosoite verkkotunnuksessa gladstone.ucsf.edu
The interconnected rhizosphere: high network complexity dominates rhizosphere assemblages
S Shi, EE Nuccio, ZJ Shi, Z He, J Zhou, MK Firestone
Ecology letters 19 (8), 926-936, 2016
GeoChip 4: a functional gene‐array‐based high‐throughput environmental technology for microbial community analysis
Q Tu, H Yu, Z He, Y Deng, L Wu, JD Van Nostrand, A Zhou, J Voordeckers, ...
Molecular ecology resources 14 (5), 914-928, 2014
Efficient genome editing in Clostridium cellulolyticum via CRISPR-Cas9 nickase
T Xu, Y Li, Z Shi, CL Hemme, Y Li, Y Zhu, JD Van Nostrand, Z He, J Zhou
Appl. Environ. Microbiol. 81 (13), 4423-4431, 2015
Aridity threshold in controlling ecosystem nitrogen cycling in arid and semi-arid grasslands
C Wang, X Wang, D Liu, H Wu, X Lü, Y Fang, W Cheng, W Luo, P Jiang, ...
Nature communications 5 (1), 1-8, 2014
Tundra soil carbon is vulnerable to rapid microbial decomposition under climate warming
K Xue, MM Yuan, ZJ Shi, Y Qin, Y Deng, L Cheng, L Wu, Z He, ...
Nature Climate Change 6 (6), 595, 2016
Soil microbial community responses to a decade of warming as revealed by comparative metagenomics
C Luo, LM Rodriguez-R, ER Johnston, L Wu, L Cheng, K Xue, Q Tu, ...
Appl. Environ. Microbiol. 80 (5), 1777-1786, 2014
Impacts of the Three Gorges Dam on microbial structure and potential function
Q Yan, Y Bi, Y Deng, Z He, L Wu, JD Van Nostrand, Z Shi, J Li, X Wang, ...
Scientific reports 5, 8605, 2015
Random sampling process leads to overestimation of β-diversity of microbial communities
J Zhou, YH Jiang, Y Deng, Z Shi, BY Zhou, K Xue, L Wu, Z He, Y Yang
MBio 4 (3), e00324-13, 2013
New insights from uncultivated genomes of the global human gut microbiome
S Nayfach, ZJ Shi, R Seshadri, KS Pollard, NC Kyrpides
Nature 568 (7753), 505-510, 2019
Comparative metagenomics reveals impact of contaminants on groundwater microbiomes
CL Hemme, Q Tu, Z Shi, Y Qin, W Gao, Y Deng, JDV Nostrand, L Wu, ...
Frontiers in microbiology 6, 1205, 2015
Climate warming leads to divergent succession of grassland microbial communities
X Guo, J Feng, Z Shi, X Zhou, M Yuan, X Tao, L Hale, T Yuan, J Wang, ...
Nature Climate Change 8 (9), 813-818, 2018
High concentrations of the antibiotic spiramycin in wastewater lead to high abundance of ammonia-oxidizing archaea in nitrifying populations
Y Zhang, Z Tian, M Liu, ZJ Shi, L Hale, J Zhou, M Yang
Environmental science & technology 49 (15), 9124-9132, 2015
Oral microbiota of periodontal health and disease and their changes after nonsurgical periodontal therapy
C Chen, C Hemme, J Beleno, ZJ Shi, D Ning, Y Qin, Q Tu, M Jorgensen, ...
The ISME journal 12 (5), 1210-1224, 2018
The functional gene composition and metabolic potential of coral-associated microbial communities
Y Zhang, J Ling, Q Yang, C Wen, Q Yan, H Sun, JD Van Nostrand, Z Shi, ...
Scientific reports 5, 16191, 2015
Microbial functional trait of rRNA operon copy numbers increases with organic levels in anaerobic digesters
L Wu, Y Yang, S Chen, ZJ Shi, M Zhao, Z Zhu, S Yang, Y Qu, Q Ma, Z He, ...
The ISME journal 11 (12), 2874-2878, 2017
Bacteriophage–prokaryote dynamics and interaction within anaerobic digestion processes across time and space
J Zhang, Q Gao, Q Zhang, T Wang, H Yue, L Wu, J Shi, Z Qin, J Zhou, ...
Microbiome 5 (1), 57, 2017
Microbial functional gene diversity predicts groundwater contamination and ecosystem functioning
Z He, P Zhang, L Wu, AM Rocha, Q Tu, Z Shi, B Wu, Y Qin, J Wang, Q Yan, ...
MBio 9 (1), e02435-17, 2018
Impacts of the Three Gorges Dam on microbial structure and potential function. Sci Rep 5: 8605
Q Yan, Y Bi, Y Deng, Z He, L Wu, JD Van Nostrand, Z Shi, J Li, X Wang, ...
Diversity and structure of diazotrophic communities in mangrove rhizosphere, revealed by high-throughput sequencing
Y Zhang, Q Yang, J Ling, JD Van Nostrand, Z Shi, J Zhou, J Dong
Frontiers in microbiology 8, 2032, 2017
Comparative metagenomics reveals impact of contaminants on groundwater microbiomes. Front Microbiol 6: 1205
CL Hemme, Q Tu, Z Shi, Y Qin, W Gao, Y Deng, JD Van Nostrand, L Wu, ...
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Artikkelit 1–20