Suwisa Keawphan
Suwisa Keawphan
University of Turku, Turku Center for Computer Science, Department of Future Technologies
Verified email at utu.fi
TitleCited byYear
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 184, 2016
1822016
UTurku: drug named entity recognition and drug-drug interaction extraction using SVM classification and domain knowledge
J Björne, S Kaewphan, T Salakoski
Second Joint Conference on Lexical and Computational Semantics (* SEM …, 2013
662013
Lysophosphatidic acid and sphingosine-1-phosphate promote morphogenesis and block invasion of prostate cancer cells in three-dimensional organotypic models
V Härmä, M Knuuttila, J Virtanen, T Mirtti, P Kohonen, P Kovanen, ...
Oncogene 31 (16), 2075, 2012
312012
Cell line name recognition in support of the identification of synthetic lethality in cancer from text
S Kaewphan, S Van Landeghem, T Ohta, Y Van de Peer, F Ginter, ...
Bioinformatics 32 (2), 276-282, 2015
152015
UTU: disease mention recognition and normalization with CRFs and vector space representations
S Kaewphan, K Hakala, F Ginter
Proceedings of the 8th international workshop on semantic evaluation …, 2014
152014
Syntactic analyses and named entity recognition for PubMed and PubMed Central—up-to-the-minute
K Hakala, S Kaewphan, T Salakoski, F Ginter
Proceedings of the 15th Workshop on Biomedical Natural Language Processing …, 2016
142016
End-to-end system for bacteria habitat extraction
F Mehryary, K Hakala, S Kaewphan, J Björne, T Salakoski, F Ginter
BioNLP 2017, 80-90, 2017
102017
Integrating large-scale text mining and co-expression networks: Targeting NADP (H) metabolism in E. coli with event extraction
S Kaewphan, S Kreula, S Van Landeghem, Y Van de Peer, PR Jones, ...
Proceedings of the Third Workshop on Building and Evaluating Resources for …, 2012
92012
Evaluating large-scale text mining applications beyond the traditional numeric performance measures
S Van Landeghem, S Kaewphan, F Ginter, Y Van de Peer
Proceedings of the 2013 Workshop on Biomedical Natural Language Processing …, 2013
42013
TurkuNLP entry for interactive Bio-ID assignment
S Kaewphan, F Mehryary, K Hakala, T Salakoski, F Ginter
Proceedings of the BioCreative VI Workshop. Bethesda, MD, 32-35, 2017
32017
Hypothesis generation in large-scale event networks
K Hakala, F Mehryary, S Kaewphan, F Ginter
Proceedings of the 5th International Symposium on Languages in Biology and …, 2013
22013
CyEVEX: Literature-scale network integration and visualization through Cytoscape
K Hakala, S Van Landeghem, S Kaewphan, T Salakoski, Y Van de Peer, ...
Proceedings of SMBM 12, 91-96, 2012
22012
Eliminating Incorrect Events from Large-Scale Event Networks by Trigger Word Clustering and Pruning
F Mehryary, S Kaewphan, K Hakala, F Ginter
The University of Turku Graduate School (UTUGS), University of Turku, Finland, 2013
12013
Neural network and random forest models in protein function prediction
K Hakala, S Kaewphan, J Björne, F Mehryary, H Moen, M Tolvanen, ...
BioRxiv, 690271, 2019
2019
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
bioRxiv, 653105, 2019
2019
Finding novel relationships with integrated gene-gene association network analysis of Synechocystis sp. PCC 6803 using species-independent text-mining
SM Kreula, S Kaewphan, F Ginter, PR Jones
PeerJ 6, e4806, 2018
2018
Wide-scope biomedical named entity recognition and normalization with CRFs, fuzzy matching and character level modeling
S Kaewphan, K Hakala, N Miekka, T Salakoski, F Ginter
Database 2018, 2018
2018
Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification
F Mehryary, S Kaewphan, K Hakala, F Ginter
Journal of biomedical semantics 7 (1), 27, 2016
2016
Third Workshop on Building and Evaluating Resources for Biomedical Text Mining Workshop Programme
J Tsujii, C Mihăilă, RT Batista-Navarro, S Ananiadou, S Kaewphan, ...
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