Leo Lahti
Leo Lahti
Computational scientist (D.Sc.), Finland / Belgium
Verified email at utu.fi - Homepage
TitleCited byYear
Binning metagenomic contigs by coverage and composition
J Alneberg, BS Bjarnason, I De Bruijn, M Schirmer, J Quick, UZ Ijaz, ...
Nature methods 11 (11), 1144, 2014
4452014
Fat, fibre and cancer risk in African Americans and rural Africans
SJD O’Keefe, JV Li, L Lahti, J Ou, F Carbonero, K Mohammed, JM Posma, ...
Nature communications 6, 6342, 2015
3672015
Intestinal microbiota in healthy adults: temporal analysis reveals individual and common core and relation to intestinal symptoms
J Jalanka-Tuovinen, A Salonen, J Nikkilä, O Immonen, R Kekkonen, ...
PloS one 6 (7), e23035, 2011
2662011
CDKN2A, NF2, and JUN are dysregulated among other genes by miRNAs in malignant mesothelioma—A miRNA microarray analysis
M Guled, L Lahti, PM Lindholm, K Salmenkivi, I Bagwan, AG Nicholson, ...
Genes, Chromosomes and Cancer 48 (7), 615-623, 2009
2572009
Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men
A Salonen, L Lahti, J Salojärvi, G Holtrop, K Korpela, SH Duncan, P Date, ...
The ISME journal 8 (11), 2218, 2014
2142014
Metagenomics meets time series analysis: unraveling microbial community dynamics
K Faust, L Lahti, D Gonze, WM De Vos, J Raes
Current opinion in microbiology 25, 56-66, 2015
1912015
Tipping elements in the human intestinal ecosystem
L Lahti, J Salojärvi, A Salonen, M Scheffer, WM De Vos
Nature communications 5, 4344, 2014
1112014
Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data
L Lahti, A Salonen, RA Kekkonen, J Salojärvi, J Jalanka-Tuovinen, ...
PeerJ 1, e32, 2013
1102013
Integrative analysis of microRNA, mRNA and aCGH data reveals asbestos‐and histology‐related changes in lung cancer
P Nymark, M Guled, I Borze, A Faisal, L Lahti, K Salmenkivi, E Kettunen, ...
Genes, Chromosomes and Cancer 50 (8), 585-597, 2011
1092011
Gene expression profiles in asbestos-exposed epithelial and mesothelial lung cell lines
P Nymark, PM Lindholm, MV Korpela, L Lahti, S Ruosaari, S Kaski, ...
BMC genomics 8 (1), 62, 2007
682007
Integrating probe-level expression changes across generations of Affymetrix arrays
LL Elo, L Lahti, H Skottman, M Kyläniemi, R Lahesmaa, T Aittokallio
Nucleic Acids Research 33 (22), e193-e193, 2005
672005
MicroRNA profiling predicts survival in anti-EGFR treated chemorefractory metastatic colorectal cancer patients with wild-type KRAS and BRAF
N Mosakhani, L Lahti, I Borze, ML Karjalainen-Lindsberg, J Sundström, ...
Cancer genetics 205 (11), 545-551, 2012
632012
The adult intestinal core microbiota is determined by analysis depth and health status
A Salonen, J Salojärvi, L Lahti, WM De Vos
Clinical Microbiology and Infection 18, 16-20, 2012
572012
Improved taxonomic assignment of human intestinal 16S rRNA sequences by a dedicated reference database
J Ritari, J Salojärvi, L Lahti, WM de Vos
BMC genomics 16 (1), 1056, 2015
492015
Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies
SA Shetty, F Hugenholtz, L Lahti, H Smidt, WM de Vos
FEMS microbiology reviews 41 (2), 182-199, 2017
442017
Unique microRNA profile in Dupuytren's contracture supports deregulation of β-catenin pathway
N Mosakhani, M Guled, L Lahti, I Borze, M Forsman, V Pääkkönen, ...
Modern pathology 23 (11), 1544, 2010
442010
Dependency detection with similarity constraints
L Lahti, S Myllykangas, S Knuutila, S Kaski
2009 IEEE International Workshop on Machine Learning for Signal Processing, 1-6, 2009
412009
Probabilistic analysis of probe reliability in differential gene expression studies with short oligonucleotide arrays
L Lahti, LL Elo, T Aittokallio, S Kaski
IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (1), 217-225, 2009
412009
Associative clustering for exploring dependencies between functional genomics data sets
S Kaski, J Nikkila, J Sinkkonen, L Lahti, JEA Knuuttila, C Roos
IEEE/ACM Transactions on Computational Biology and bioinformatics 2 (3), 203-216, 2005
412005
A novel atlas of gene expression in human skeletal muscle reveals molecular changes associated with aging
J Su, C Ekman, N Oskolkov, L Lahti, K Ström, A Brazma, L Groop, J Rung, ...
Skeletal muscle 5 (1), 35, 2015
402015
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Articles 1–20